RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 RNF121Q9H920 327 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 EMC7Q9NPA0 242 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 FBXL3Q9UKT7 428 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 RTTNQ86VV8 2226 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 LRBAP50851 2863 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 ZAR1LA6NP61 321 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 C12orf71A8MTZ7 269 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 FAM171A2A8MVW0 826 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 SHISA9B4DS77 424 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 RAB36O95755 333 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 GPANK1O95872 356 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 SERPINA5P05154 406 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 GAAP10253 952 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 ZNF32P17041 273 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 POLR2IP36954 125 aaKnown RBP11.23□□□□□ -0.61
SMPD1-202ENST00000526280 CENPAP49450 140 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 ALDH3A2P51648 485 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 PCBD1P61457 104 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 LSM6P62312 80 aaKnown RBP11.23□□□□□ -0.61
SMPD1-202ENST00000526280 NAAAQ02083 359 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 HSF2Q03933 536 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 SPOCK1Q08629 439 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 RAB39AQ14964 217 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 ADAM5Q6NVV9 412 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 ZNF584Q8IVC4 421 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 PIAS4Q8N2W9 510 aaPredicted RBP11.23□□□□□ -0.61
SMPD1-202ENST00000526280 IL17RDQ8NFM7 739 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 SLC26A10Q8NG04 563 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 OR9Q1Q8NGQ5 310 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 ZNRF4Q8WWF5 429 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 C11orf40Q8WZ69 217 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 PTP4A1Q93096 173 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 MS4A3Q96HJ5 214 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 LURAP1Q96LR2 239 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 CNBD2Q96M20 576 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 WACQ9BTA9 647 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 GABARAPL3Q9BY60 117 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 CCNB1IP1Q9NPC3 277 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 C8orf4Q9NR00 106 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 UBAP1Q9NZ09 502 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 TIMM10BQ9Y5J6 103 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 PLCE1Q9P212 2302 aa11.23□□□□□ -0.61
SMPD1-202ENST00000526280 POLQO75417 2590 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 FAM183AA6NL82 134 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 CRYAAP02489 173 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 TFP02787 698 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 CLUP10909 449 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 SPI1P17947 270 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 PAICSP22234 425 aaKnown RBP11.22□□□□□ -0.61
SMPD1-202ENST00000526280 PYCR1P32322 319 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 PSG4Q00888 419 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 SNAPC1Q16533 368 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 ZNF672Q499Z4 452 aaPredicted RBP11.22□□□□□ -0.61
SMPD1-202ENST00000526280 SLX4IPQ5VYV7 408 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 SLC22A25Q6T423 547 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 DEPDC4Q8N2C3 294 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 PROKR2Q8NFJ6 384 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 KBTBD8Q8NFY9 601 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 AKAP1Q92667 903 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMPD1-202ENST00000526280 HCAR1Q9BXC0 346 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 TVP23BQ9NYZ1 205 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 MOKQ9UQ07 419 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 ORC6Q9Y5N6 252 aa11.22□□□□□ -0.61
SMPD1-202ENST00000526280 IGHV2OR16-5A0A0B4J2B6 119 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 PRR23D1E9PI22 279 aaPredicted RBP11.21□□□□□ -0.61
SMPD1-202ENST00000526280 ATP6V1G2-DDX39BF2Z307 99 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 HS3ST1O14792 307 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 PTHP01270 115 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 HLA-DQA2P01906 255 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 GYPBP06028 91 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 PRR23D2P0DMB1 279 aaPredicted RBP11.21□□□□□ -0.61
SMPD1-202ENST00000526280 ZNF35P13682 527 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 CALCRP30988 508 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 RAD23AP54725 363 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 EFNB1P98172 346 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 TEKQ02763 1124 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 PLP2Q04941 152 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 AQP6Q13520 282 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 MEP1BQ16820 701 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 PABPC1L2AQ5JQF8 200 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 LINC01590Q5TEZ4 76 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 OTPQ5XKR4 325 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 C12orf73Q69YU5 71 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 CPOQ8IVL8 374 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 CPEB3Q8NE35 698 aaKnown RBP11.21□□□□□ -0.61
SMPD1-202ENST00000526280 OR51L1Q8NGJ5 315 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 NRGNQ92686 78 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 NEUROG1Q92886 237 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 OTULINQ96BN8 352 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 PLEKHA8Q96JA3 519 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 KCNS3Q9BQ31 491 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 OR2H1Q9GZK4 316 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 WNT5BQ9H1J7 359 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 LIME1Q9H400 295 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 C1orf198Q9H425 327 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 RIBC2Q9H4K1 309 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 MED20Q9H944 212 aa11.21□□□□□ -0.61
SMPD1-202ENST00000526280 HINT3Q9NQE9 182 aaKnown RBP11.21□□□□□ -0.61
SMPD1-202ENST00000526280 MRPL22Q9NWU5 206 aaKnown RBP11.21□□□□□ -0.61
SMPD1-202ENST00000526280 IQCMA0A1B0GVH7 501 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms