RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 DTNBP1Q96EV8 351 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 SLC47A1Q96FL8 570 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 DUS3LQ96G46 650 aaKnown RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 SH3YL1Q96HL8 342 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 ZNF385AQ96PM9 386 aaKnown RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 MCHR1Q99705 422 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 TXN2Q99757 166 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 ARHGDIGQ99819 225 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 ZNF559Q9BR84 538 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 CHID1Q9BWS9 393 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 OSBPL11Q9BXB4 747 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 HES7Q9BYE0 225 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 YY1AP1Q9H869 796 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 IL1RAPQ9NPH3 570 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 EXOSC3Q9NQT5 275 aaKnown RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 ZNF71Q9NQZ8 489 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 DEPPQ9NTK1 212 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 EXTL2Q9UBQ6 330 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 RPS6KB2Q9UBS0 482 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 ZMAT5Q9UDW3 170 aaKnown RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 MALT1Q9UDY8 824 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 ICAM5Q9UMF0 924 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 BOKQ9UMX3 212 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 TP53TG5Q9Y2B4 290 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 RPH3AQ9Y2J0 694 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 AP4S1Q9Y587 144 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 N6AMT1Q9Y5N5 214 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 CSAG2Q9Y5P2 127 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 WIF1Q9Y5W5 379 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 HEATR5AQ86XA9 2040 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 AHCTF1Q8WYP5 2266 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 A0A087WZY1 265 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 IGLV3-32A0A0A0MS00 114 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 TRAPPC13A5PLN9 417 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 PINLYPA6NC86 204 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ANKUB1A6NFN9 424 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 hCG_2039718K7EN88 272 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 FAAHO00519 579 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 CDC40O60508 579 aaKnown RBP eCLIP3.95□□□□□ -1.78
USP48-211ENST00000526044 TPST2O60704 377 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 NDUFS7O75251 213 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 BCAS1O75363 584 aaPredicted RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 CLDN14O95500 239 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 PTBP3O95758 552 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 FABP3P05413 133 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 HOXB5P09067 269 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 PRG2P13727 222 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 DPP4P27487 766 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 GDF1P27539 372 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 EIF1P41567 113 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 ACAA2P42765 397 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 SLC1A3P43003 542 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 YAP1P46937 504 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 CCR4P51679 360 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ZNF136P52737 540 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 DSCR4P56555 118 aaPredicted RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 SMIM11AP58511 58 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 TAS2R41P59536 307 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 PPIAP62937 165 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 ELF3P78545 371 aaPredicted RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 HOXC5Q00444 222 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ST3GAL3Q11203 375 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 NPRL3Q12980 569 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 SKP2Q13309 424 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 SLC10A1Q14973 349 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 QPRTQ15274 297 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 OR1Q1Q15612 314 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 NRF1Q16656 503 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 MEP1BQ16820 701 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 HYAL4Q2M3T9 481 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 NDUFAF6Q330K2 333 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 GLYR1Q49A26 553 aaPredicted RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 NADK2Q4G0N4 442 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 WBP2NLQ6ICG8 309 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ZFP1Q6P2D0 407 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 FAM122CQ6P4D5 195 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 TMEM154Q6P9G4 183 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ULK3Q6PHR2 472 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 YRDCQ86U90 279 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 COMTD1Q86VU5 262 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 SLC22A16Q86VW1 577 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 RBM45Q8IUH3 476 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 LACC1Q8IV20 430 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ZDHHC21Q8IVQ6 265 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 CADM2Q8N3J6 435 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 FAM86B1Q8N7N1 296 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 FADS6Q8N9I5 356 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ZFP62Q8NB50 900 aaPredicted RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 PAPD5Q8NDF8 572 aaKnown RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 FAM71CQ8NEG0 241 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 OR4D11Q8NGI4 311 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 DNAJA4Q8WW22 397 aaPredicted RBP3.95□□□□□ -1.78
USP48-211ENST00000526044 PYDC1Q8WXC3 89 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 NR4A3Q92570 626 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 PNPLA2Q96AD5 504 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 SLCO4A1Q96BD0 722 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 WBP1Q96G27 269 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 C7orf34Q96L11 122 aa3.95□□□□□ -1.78
USP48-211ENST00000526044 ZNF597Q96LX8 424 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms