RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 BCL6BQ8N143 479 aaPredicted RBP20.22■□□□□ 0.83
USP47-205ENST00000525257 TMEM239Q8WW34 195 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 RASSF5Q8WWW0 418 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 DIRC2Q96SL1 478 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 EGFL7Q9UHF1 273 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 KLHL21Q9UJP4 597 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 AUP1Q9Y679 476 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 TRAPPC2LH3BP13 241 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 H3BSA7 217 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 IGHMP01871 453 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 TSPAN19P0C672 248 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 NR2C1P13056 603 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 VMACQ2NL98 169 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 TUSC1Q2TAM9 212 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 KLF17Q5JT82 389 aaPredicted RBP20.21■□□□□ 0.83
USP47-205ENST00000525257 ZNF774Q6NX45 483 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 C1orf174Q8IYL3 243 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 CLDN22Q8N7P3 220 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 TXNIPQ9H3M7 391 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 RIMS3Q9UJD0 308 aa20.21■□□□□ 0.83
USP47-205ENST00000525257 GMNCA6NCL1 334 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 NPIPB13A6NJU9 1138 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 NPIPB4C9JG80 1138 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 CST2P09228 141 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 ARHGDIAP52565 204 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 SEC61A1P61619 476 aaKnown RBP20.2■□□□□ 0.82
USP47-205ENST00000525257 ZNF154Q13106 437 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 BAMBIQ13145 260 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 PIN1Q13526 163 aaPredicted RBP20.2■□□□□ 0.82
USP47-205ENST00000525257 MTX3Q5HYI7 312 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 CCDC80Q76M96 950 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 SPICQ8N5J4 248 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 THOC1Q96FV9 657 aaKnown RBP20.2■□□□□ 0.82
USP47-205ENST00000525257 C4orf45Q96LM5 186 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 C1orf147Q96MC9 270 aaPredicted RBP20.2■□□□□ 0.82
USP47-205ENST00000525257 ELOVL3Q9HB03 270 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 TMEM106BQ9NUM4 274 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 PLEK2Q9NYT0 353 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 TIMM10BQ9Y5J6 103 aa20.2■□□□□ 0.82
USP47-205ENST00000525257 PIP5K1CO60331 668 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 ICMTO60725 284 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 OR5F1O95221 314 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 IGF2P01344 180 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 GZMMP51124 257 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 PSG7Q13046 419 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 CDK5R2Q13319 367 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 ALG10Q5BKT4 473 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 KLHL36Q8N4N3 616 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 LIPHQ8WWY8 451 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 ZNF48Q96MX3 618 aaPredicted RBP20.19■□□□□ 0.82
USP47-205ENST00000525257 RBP7Q96R05 134 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 GPA33Q99795 319 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 ALG12Q9BV10 488 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 UNKLQ9H9P5 680 aaKnown RBP20.19■□□□□ 0.82
USP47-205ENST00000525257 ZMAT3Q9HA38 289 aaKnown RBP20.19■□□□□ 0.82
USP47-205ENST00000525257 PATZ1Q9HBE1 687 aaKnown RBP20.19■□□□□ 0.82
USP47-205ENST00000525257 MED31Q9Y3C7 131 aa20.19■□□□□ 0.82
USP47-205ENST00000525257 A0A1W2PPL8 197 aa20.18■□□□□ 0.82
USP47-205ENST00000525257 ZNF12P17014 697 aa20.18■□□□□ 0.82
USP47-205ENST00000525257 PCBD1P61457 104 aa20.18■□□□□ 0.82
USP47-205ENST00000525257 MRI1Q9BV20 369 aa20.18■□□□□ 0.82
USP47-205ENST00000525257 POFUT1Q9H488 388 aa20.18■□□□□ 0.82
USP47-205ENST00000525257 BAG5Q9UL15 447 aa20.18■□□□□ 0.82
USP47-205ENST00000525257 INSIG2Q9Y5U4 225 aa20.18■□□□□ 0.82
USP47-205ENST00000525257 ABHD16AO95870 558 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 GUCA1AP43080 201 aaPredicted RBP20.17■□□□□ 0.82
USP47-205ENST00000525257 OR1E2P47887 323 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 SLC6A9P48067 706 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 RPL27P61353 136 aaKnown RBP20.17■□□□□ 0.82
USP47-205ENST00000525257 ENDOGQ14249 297 aaKnown RBP20.17■□□□□ 0.82
USP47-205ENST00000525257 ZMYND11Q15326 602 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 TMEM155Q4W5P6 130 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 AGBL2Q5U5Z8 902 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 ZER1Q7Z7L7 766 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 IGFN1Q86VF2 1251 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 ZNF283Q8N7M2 679 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 OR2Z1Q8NG97 314 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 DYDC1Q8WWB3 177 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 POLR2J2Q9GZM3 115 aaKnown RBP20.17■□□□□ 0.82
USP47-205ENST00000525257 POLR2J3Q9H1A7 115 aaKnown RBP20.17■□□□□ 0.82
USP47-205ENST00000525257 HIF3AQ9Y2N7 669 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 POLR3KQ9Y2Y1 108 aaPredicted RBP20.17■□□□□ 0.82
USP47-205ENST00000525257 CMYA5Q8N3K9 4069 aa20.17■□□□□ 0.82
USP47-205ENST00000525257 TNFSF4P23510 183 aa20.16■□□□□ 0.82
USP47-205ENST00000525257 BTG1P62324 171 aa20.16■□□□□ 0.82
USP47-205ENST00000525257 ARL9Q6T311 187 aa20.16■□□□□ 0.82
USP47-205ENST00000525257 FOXL2NBQ6ZUU3 175 aa20.16■□□□□ 0.82
USP47-205ENST00000525257 LRRC28Q86X40 367 aaPredicted RBP20.16■□□□□ 0.82
USP47-205ENST00000525257 TAF15Q92804 592 aaKnown RBP eCLIP20.16■□□□□ 0.82
USP47-205ENST00000525257 RNASE1P07998 156 aaKnown RBP20.15■□□□□ 0.82
USP47-205ENST00000525257 TNFRSF1AP19438 455 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 GSTM3P21266 225 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 MSR1P21757 451 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 CTXN1P60606 82 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 RABL3Q5HYI8 236 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 BEND6Q5SZJ8 279 aaPredicted RBP20.15■□□□□ 0.82
USP47-205ENST00000525257 NANOGP8Q6NSW7 305 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 TREML4Q6UXN2 200 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 Q6ZR03 302 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 FNDC8Q8TC99 324 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms