RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 VANGL1Q8TAA9 524 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-211ENST00000523441 TBC1D15Q8TC07 691 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 ITPKCQ96DU7 683 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 NEIL1Q96FI4 390 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-211ENST00000523441 ITCHQ96J02 903 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 PLEKHA8Q96JA3 519 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 FAM71F1Q96KD3 344 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-211ENST00000523441 SAMD8Q96LT4 415 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 TECTBQ96PL2 329 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 OR8B2Q96RD0 313 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 SORT1Q99523 831 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 MCHR1Q99705 422 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 PAIP2Q9BPZ3 127 aaKnown RBP9.7□□□□□ -0.86
SDCBP-211ENST00000523441 TMEM246Q9BRR3 403 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 RMND5AQ9H871 391 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 A4GALTQ9NPC4 353 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 NOX4Q9NPH5 578 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 CLN8Q9UBY8 286 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 KLHL21Q9UJP4 597 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 IGKV1D-43A0A0B4J1Z2 117 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 KIR2DS1A0A191URI9 304 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 A0A1W2PPL8 197 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 A0A1W2PRG6 482 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 CLIC1O00299 241 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 SDHDO14521 159 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 TRMUO75648 421 aaKnown RBP9.69□□□□□ -0.86
SDCBP-211ENST00000523441 CLPXO76031 633 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 ABHD16AO95870 558 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 IL6P05231 212 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 ADH4P08319 380 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 LAP3P28838 519 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 DBPQ10586 325 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-211ENST00000523441 TOP3AQ13472 1001 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-211ENST00000523441 ZNF74Q16587 644 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 GCNT6Q5T4J0 391 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 TTC33Q6PID6 262 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-211ENST00000523441 SLC2A7Q6PXP3 512 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 LYPD2Q6UXB3 125 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 Q6ZSV7 163 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 VASH1Q7L8A9 365 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-211ENST00000523441 KRT73Q86Y46 540 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 LYG1Q8N1E2 194 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 FITM2Q8N6M3 262 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 OR9I1Q8NGQ6 314 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 SSMEM1Q8WWF3 244 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 SGCDQ92629 289 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 DYRK2Q92630 601 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 LHX4Q969G2 390 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 SLC35B4Q969S0 331 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 CMBLQ96DG6 245 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 C4orf45Q96LM5 186 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 TMEM43Q9BTV4 400 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 OR2H1Q9GZK4 316 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 WNT5BQ9H1J7 359 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 TOR3AQ9H497 397 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 SIAEQ9HAT2 523 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 ELOVL3Q9HB03 270 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 TMEM165Q9HC07 324 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 BCL2L10Q9HD36 194 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 GCM1Q9NP62 436 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 THUMPD1Q9NXG2 353 aaKnown RBP9.69□□□□□ -0.86
SDCBP-211ENST00000523441 KIF17Q9P2E2 1029 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 MIOXQ9UGB7 285 aa9.69□□□□□ -0.86
SDCBP-211ENST00000523441 A0A0U1RQK1 487 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 TOX4O94842 621 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 OPN1SWP03999 348 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 PPIAL4GP0DN37 164 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 ETS2P15036 469 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 ACADSP16219 412 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 GSTM3P21266 225 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 LOXL3P58215 753 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 HOXA4Q00056 320 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-211ENST00000523441 CDK6Q00534 326 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 PRB3Q04118 309 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-211ENST00000523441 OXLD1Q5BKU9 147 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 HHATQ5VTY9 493 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 FAM205BPQ63HN1 556 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 OGFOD2Q6N063 350 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 DHRS4L2Q6PKH6 230 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 NLRC3Q7RTR2 1065 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 ZER1Q7Z7L7 766 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 MOGAT3Q86VF5 341 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 ALDH16A1Q8IZ83 802 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 C10orf111Q8N326 155 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 CLDN22Q8N7P3 220 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 BOLLQ8N9W6 283 aaKnown RBP9.68□□□□□ -0.86
SDCBP-211ENST00000523441 ASB10Q8WXI3 467 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 GATAD2BQ8WXI9 593 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 NABP1Q96AH0 204 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 SPATA5L1Q9BVQ7 753 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 SEMA6AQ9H2E6 1030 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 MMADHCQ9H3L0 296 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-211ENST00000523441 RAD21L1Q9H4I0 556 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 CGGBP1Q9UFW8 167 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-211ENST00000523441 IL19Q9UHD0 177 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 SLC7A7Q9UM01 511 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 POMT1Q9Y6A1 747 aa9.68□□□□□ -0.86
SDCBP-211ENST00000523441 CENPVL3A0A0U1RRI6 287 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 ZNF816-ZNF321PA0A0X1KG74 233 aa9.67□□□□□ -0.86
SDCBP-211ENST00000523441 C22orf46C9J442 243 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms