RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SLC6A9P48067 706 aa21.84■■□□□ 1.09
PVT1-219ENST00000523427 ZMAT1Q5H9K5 638 aa21.84■■□□□ 1.09
PVT1-219ENST00000523427 ZNF774Q6NX45 483 aa21.84■■□□□ 1.09
PVT1-219ENST00000523427 PATL1Q86TB9 770 aaKnown RBP21.84■■□□□ 1.09
PVT1-219ENST00000523427 CLDN22Q8N7P3 220 aa21.84■■□□□ 1.09
PVT1-219ENST00000523427 OR2Z1Q8NG97 314 aa21.84■■□□□ 1.09
PVT1-219ENST00000523427 TMEM255BQ8WV15 326 aa21.84■■□□□ 1.09
PVT1-219ENST00000523427 C4orf45Q96LM5 186 aa21.84■■□□□ 1.09
PVT1-219ENST00000523427 DIRC2Q96SL1 478 aa21.84■■□□□ 1.09
PVT1-219ENST00000523427 CCDC28BQ9BUN5 200 aa21.84■■□□□ 1.09
PVT1-219ENST00000523427 TGDSO95455 350 aa21.83■■□□□ 1.09
PVT1-219ENST00000523427 RNASE1P07998 156 aaKnown RBP21.83■■□□□ 1.09
PVT1-219ENST00000523427 VIMP08670 466 aaKnown RBP21.83■■□□□ 1.09
PVT1-219ENST00000523427 TNFRSF1BP20333 461 aa21.83■■□□□ 1.09
PVT1-219ENST00000523427 MDKP21741 143 aaPredicted RBP21.83■■□□□ 1.09
PVT1-219ENST00000523427 ARHGDIAP52565 204 aa21.83■■□□□ 1.09
PVT1-219ENST00000523427 ZNF133P52736 654 aaPredicted RBP21.83■■□□□ 1.09
PVT1-219ENST00000523427 TAS2R41P59536 307 aa21.83■■□□□ 1.09
PVT1-219ENST00000523427 PSG7Q13046 419 aa21.83■■□□□ 1.09
PVT1-219ENST00000523427 SLC9A3R2Q15599 337 aa21.83■■□□□ 1.09
PVT1-219ENST00000523427 CGGBP1Q9UFW8 167 aaPredicted RBP21.83■■□□□ 1.09
PVT1-219ENST00000523427 SH3GLB1Q9Y371 365 aa21.83■■□□□ 1.09
PVT1-219ENST00000523427 CD55P08174 381 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 IGHV4-38-2P0DP08 117 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 TNFSF4P23510 183 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 ZMYND11Q15326 602 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 TUSC1Q2TAM9 212 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 FAM27BQ5VT28 67 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 SLC25A47Q6Q0C1 308 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 OR52E2Q8NGJ4 325 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 NMD3Q96D46 503 aaKnown RBP21.82■■□□□ 1.08
PVT1-219ENST00000523427 CGREF1Q99674 301 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 ELOVL3Q9HB03 270 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 STX18Q9P2W9 335 aaKnown RBP21.82■■□□□ 1.08
PVT1-219ENST00000523427 OR5V1Q9UGF6 321 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 TIMM10BQ9Y5J6 103 aa21.82■■□□□ 1.08
PVT1-219ENST00000523427 A0A1W2PPL8 197 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 POM121CA8CG34 1229 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 ERLIN1O75477 346 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 GUCA1AP43080 201 aaPredicted RBP21.81■■□□□ 1.08
PVT1-219ENST00000523427 BTG1P62324 171 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 CDK5R2Q13319 367 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 ESCO2Q56NI9 601 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 SPATC1Q76KD6 591 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 LRRC28Q86X40 367 aaPredicted RBP21.81■■□□□ 1.08
PVT1-219ENST00000523427 OR10A6Q8NH74 314 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 ITLN1Q8WWA0 313 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 C7orf26Q96N11 449 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 RBP7Q96R05 134 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 PCDHAC1Q9H158 963 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 POFUT1Q9H488 388 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 SMURF2Q9HAU4 748 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 RAB21Q9UL25 225 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 NDUFAF1Q9Y375 327 aa21.81■■□□□ 1.08
PVT1-219ENST00000523427 TANC2Q9HCD6 1990 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 ZNF205O95201 554 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 ABHD16AO95870 558 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 CD80P33681 288 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 TMEM155Q4W5P6 130 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 C1orf174Q8IYL3 243 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 LRRC8CQ8TDW0 803 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 TMEM239Q8WW34 195 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 TXNIPQ9H3M7 391 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 TNFRSF19Q9NS68 423 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 PPP1R3CQ9UQK1 317 aa21.8■■□□□ 1.08
PVT1-219ENST00000523427 MDFIC2A0A1B0GVS7 189 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 ANGPT2O15123 496 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 CST2P09228 141 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 TNFRSF1AP19438 455 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 MTNR1AP48039 350 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 SRSF4Q08170 494 aaKnown RBP21.79■■□□□ 1.08
PVT1-219ENST00000523427 PIN1Q13526 163 aaPredicted RBP21.79■■□□□ 1.08
PVT1-219ENST00000523427 NFYCQ13952 458 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 ARL9Q6T311 187 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 ZER1Q7Z7L7 766 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 IGFN1Q86VF2 1251 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 PARP8Q8N3A8 854 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 ZNF283Q8N7M2 679 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 TMIGD2Q96BF3 282 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 TLCD1Q96CP7 247 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 SAMD8Q96LT4 415 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 RIMS3Q9UJD0 308 aa21.79■■□□□ 1.08
PVT1-219ENST00000523427 H3BSA7 217 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 PIP5K1CO60331 668 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 NR2C1P13056 603 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 GSTM3P21266 225 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 PCBD1P61457 104 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 ALG10Q5BKT4 473 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 INTS11Q5TA45 600 aaKnown RBP21.78■■□□□ 1.08
PVT1-219ENST00000523427 Q6ZR03 302 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 SLC30A8Q8IWU4 369 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 CMBLQ96DG6 245 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 THOC1Q96FV9 657 aaKnown RBP21.78■■□□□ 1.08
PVT1-219ENST00000523427 KAT8Q9H7Z6 458 aaKnown RBP21.78■■□□□ 1.08
PVT1-219ENST00000523427 TMBIM4Q9HC24 238 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 POLR3KQ9Y2Y1 108 aaPredicted RBP21.78■■□□□ 1.08
PVT1-219ENST00000523427 MED31Q9Y3C7 131 aa21.78■■□□□ 1.08
PVT1-219ENST00000523427 RBM34P42696 430 aaKnown RBP21.77■■□□□ 1.08
PVT1-219ENST00000523427 CRYBA2P53672 197 aa21.77■■□□□ 1.08
PVT1-219ENST00000523427 C1orf94Q6P1W5 598 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms