RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 RNF41Q9H4P4 317 aaPredicted RBP3.84□□□□□ -1.79
SKP1-211ENST00000523359 ALG9Q9H6U8 611 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 PLEKHA1Q9HB21 404 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 PATZ1Q9HBE1 687 aaKnown RBP3.84□□□□□ -1.79
SKP1-211ENST00000523359 VCX3AQ9NNX9 186 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 RPS10P5Q9NQ39 176 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 BABAM2Q9NXR7 383 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 VNN3Q9NY84 501 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 FBXL3Q9UKT7 428 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 SCML2Q9UQR0 700 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 WIF1Q9Y5W5 379 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 V9GYY9 64 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 KIAA0232Q92628 1395 aa3.84□□□□□ -1.79
SKP1-211ENST00000523359 COL22A1Q8NFW1 1626 aaPredicted RBP3.84□□□□□ -1.8
SKP1-211ENST00000523359 FAM74A7A6NL05 159 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 VSTM2BA6NLU5 285 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 E9PAM4 449 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 G3V4G9 280 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 DCTN6O00399 190 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 PLPP3O14495 311 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 PPP1R2P9O14990 202 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 TM9SF1O15321 606 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 SLC31A1O15431 190 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 PLEKHA8P1O95397 391 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 CA1P00915 261 aaPredicted RBP3.83□□□□□ -1.8
SKP1-211ENST00000523359 MMP1P03956 469 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 H2AFXP16104 143 aaPredicted RBP3.83□□□□□ -1.8
SKP1-211ENST00000523359 MAP3K8P41279 467 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 ELK3P41970 407 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 SLC1A1P43005 524 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 BDKRB1P46663 353 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 CSNK1A1P48729 337 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 RAG2P55895 527 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 SPCS3P61009 180 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 RPS15AP62244 130 aaKnown RBP3.83□□□□□ -1.8
SKP1-211ENST00000523359 LSM6P62312 80 aaKnown RBP3.83□□□□□ -1.8
SKP1-211ENST00000523359 NTHL1P78549 312 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 C2orf80Q0P641 193 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 PDIA2Q13087 525 aaKnown RBP3.83□□□□□ -1.8
SKP1-211ENST00000523359 TPBGQ13641 420 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 ABRAXAS2Q15018 415 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 GUK1Q16774 197 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 PGGHGQ32M88 737 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 CHRFAM7AQ494W8 412 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 FAM74A3Q4VXF1 159 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 C14orf28Q4W4Y0 310 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 EIPR1Q53HC9 387 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 FAM219BQ5XKK7 198 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 PNCKQ6P2M8 343 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 FAHD1Q6P587 224 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 SPESP1Q6UW49 350 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 APOOLQ6UXV4 268 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 C19orf35Q6ZS72 473 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 PGAP1Q75T13 922 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 CDC20BQ86Y33 519 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 HIPK1Q86Z02 1210 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 APOBEC3FQ8IUX4 373 aaKnown RBP3.83□□□□□ -1.8
SKP1-211ENST00000523359 DHRSXQ8N5I4 330 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 CATSPER1Q8NEC5 780 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 OR5B17Q8NGF7 314 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 OR6T1Q8NGN1 323 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 SETD7Q8WTS6 366 aaKnown RBP3.83□□□□□ -1.8
SKP1-211ENST00000523359 BAALCQ8WXS3 180 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 CPXM1Q96SM3 734 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 ATP5SQ99766 215 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 KLHDC3Q9BQ90 382 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 UTP23Q9BRU9 249 aaKnown RBP3.83□□□□□ -1.8
SKP1-211ENST00000523359 DCUN1D5Q9BTE7 237 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 ZYG11BQ9C0D3 744 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 CHRNA10Q9GZZ6 450 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 PPA2Q9H2U2 334 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 CYB5R1Q9UHQ9 305 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 ERVW-1Q9UQF0 538 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 AK6Q9Y3D8 172 aaKnown RBP3.83□□□□□ -1.8
SKP1-211ENST00000523359 RAB3GAP2Q9H2M9 1393 aa3.83□□□□□ -1.8
SKP1-211ENST00000523359 TP53BP1Q12888 1972 aaPredicted RBP3.83□□□□□ -1.8
SKP1-211ENST00000523359 NUP153P49790 1475 aaKnown RBP3.82□□□□□ -1.8
SKP1-211ENST00000523359 A0A0A6YYD5 115 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 PSMB11A5LHX3 300 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 C2orf74A8MZ97 194 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 ZNF487B1APH4 448 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 G3V3Y1 287 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 CASKO14936 926 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 CFLARO15519 480 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 RCBTB2O95199 551 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 LRATO95237 230 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 LYPLA2O95372 231 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 PSMG1O95456 288 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 C1orf105O95561 183 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 AP2A1O95782 977 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 TNNC2P02585 160 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 FGGP02679 453 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 GSTA1P08263 222 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 ZNF35P13682 527 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 IFNA8P32881 189 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 SAA4P35542 130 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 DDOSTP39656 456 aa3.82□□□□□ -1.8
SKP1-211ENST00000523359 TMED10P49755 219 aaKnown RBP3.82□□□□□ -1.8
SKP1-211ENST00000523359 MFAP2P55001 183 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms