RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 C6orf141Q5SZD1 244 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 LCN1P1Q5VSP4 162 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 KRT80Q6KB66 452 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 ANKRD16Q6P6B7 361 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 BHLHA15Q7RTS1 189 aaPredicted RBP10.43□□□□□ -0.74
PVT1-215ENST00000522963 SKA3Q8IX90 412 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 TIGD4Q8IY51 512 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 C1orf162Q8NEQ5 155 aaPredicted RBP10.43□□□□□ -0.74
PVT1-215ENST00000522963 RFKQ969G6 155 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 SH3GL3Q99963 347 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 WDR76Q9H967 626 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 MARCH7Q9H992 704 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 SIAEQ9HAT2 523 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 COMMD3-BMI1R4GMX3 469 aa10.43□□□□□ -0.74
PVT1-215ENST00000522963 A6NNC1 897 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 SELENOFO60613 162 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 APOL3O95236 402 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 HRGP04196 525 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 MRPL3P09001 348 aaKnown RBP10.42□□□□□ -0.74
PVT1-215ENST00000522963 OR8G3PP0DMU2 310 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 DBTP11182 482 aaKnown RBP10.42□□□□□ -0.74
PVT1-215ENST00000522963 NAA10P41227 235 aaPredicted RBP10.42□□□□□ -0.74
PVT1-215ENST00000522963 MTNR1AP48039 350 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 TMED1Q13445 227 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 MED21Q13503 144 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 GGTLC2Q14390 218 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 TBRG1Q3YBR2 411 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 NRN1LQ496H8 165 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 FAM27BQ5VT28 67 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 WFDC8Q8IUA0 241 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 ERI1Q8IV48 349 aaKnown RBP10.42□□□□□ -0.74
PVT1-215ENST00000522963 LRRC18Q8N456 261 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 BPIFB6Q8NFQ5 453 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 OR51G2Q8NGK0 314 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 FGFBP3Q8TAT2 258 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 SMAP2Q8WU79 429 aaPredicted RBP10.42□□□□□ -0.74
PVT1-215ENST00000522963 LGALS12Q96DT0 336 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 RNFT2Q96EX2 444 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 BOD1Q96IK1 185 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 DACH2Q96NX9 599 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 INTS14Q96SY0 518 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 ZNF416Q9BWM5 594 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 HDHD5Q9BXW7 423 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 ACTR6Q9GZN1 396 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 ADGRL4Q9HBW9 690 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 HAO2Q9NYQ3 351 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 ZNF224Q9NZL3 707 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.42□□□□□ -0.74
PVT1-215ENST00000522963 RPL36Q9Y3U8 105 aaKnown RBP10.42□□□□□ -0.74
PVT1-215ENST00000522963 NBPF19A0A087WUL8 3843 aa10.42□□□□□ -0.74
PVT1-215ENST00000522963 SPG11Q96JI7 2443 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 ZNF503-AS2A6NEH8 195 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 SNTNA6NMZ2 147 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 ZNF593O00488 134 aaPredicted RBP10.41□□□□□ -0.74
PVT1-215ENST00000522963 XPNPEP2O43895 674 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 FARS2O95363 451 aaKnown RBP10.41□□□□□ -0.74
PVT1-215ENST00000522963 CST2P09228 141 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 SBK2P0C263 348 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 PATE4P0C8F1 98 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 ZNF823P16415 610 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 RPS27P42677 84 aaKnown RBP10.41□□□□□ -0.74
PVT1-215ENST00000522963 SLC15A1P46059 708 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 ENTPD1P49961 510 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 HCCSP53701 268 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 LSM6P62312 80 aaKnown RBP10.41□□□□□ -0.74
PVT1-215ENST00000522963 TUBA1BP68363 451 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 TUBA4AP68366 448 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 ADAM8P78325 824 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 CRYBG3Q68DQ2 2970 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 OR7E24Q6IFN5 339 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 C22orf34Q6ZV56 151 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 TUBA1AQ71U36 451 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 SHFQ7M4L6 423 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 SLC16A14Q7RTX9 510 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 SLC16A9Q7RTY1 509 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 ZNF786Q8N393 782 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 WDR31Q8NA23 367 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 STEAP2Q8NFT2 490 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 OR10H5Q8NGA6 315 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 OR4F15Q8NGB8 312 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 OR6N2Q8NGY6 317 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 S100PBPQ96BU1 408 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 FBXO17Q96EF6 278 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 LURAP1Q96LR2 239 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 CNN2Q99439 309 aaKnown RBP10.41□□□□□ -0.74
PVT1-215ENST00000522963 RHNO1Q9BSD3 238 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 SLC17A5Q9NRA2 495 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 PLCXD1Q9NUJ7 323 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 MRPS18AQ9NVS2 196 aaKnown RBP10.41□□□□□ -0.74
PVT1-215ENST00000522963 LHFPL6Q9Y693 200 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 ITPR2Q14571 2701 aa10.41□□□□□ -0.74
PVT1-215ENST00000522963 ARPC4-TTLL3A0A0A6YYG9 625 aa10.4□□□□□ -0.74
PVT1-215ENST00000522963 A0A1W2PR80 420 aa10.4□□□□□ -0.74
PVT1-215ENST00000522963 OR5H1A6NKK0 313 aa10.4□□□□□ -0.74
PVT1-215ENST00000522963 SLC1A7O00341 560 aa10.4□□□□□ -0.74
PVT1-215ENST00000522963 FAM20BO75063 409 aa10.4□□□□□ -0.74
PVT1-215ENST00000522963 CTAG2O75638 210 aa10.4□□□□□ -0.74
PVT1-215ENST00000522963 HLA-HP01893 362 aa10.4□□□□□ -0.74
PVT1-215ENST00000522963 SPARCP09486 303 aa10.4□□□□□ -0.74
PVT1-215ENST00000522963 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms