RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ACSM1Q08AH1 577 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 KIAA0141Q14154 515 aaPredicted RBP14.78□□□□□ -0.04
USP42-207ENST00000521713 ZNF385BQ569K4 471 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 YIF1BQ5BJH7 314 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 ZNF680Q8NEM1 530 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 PSMF1Q92530 271 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 GHSRQ92847 366 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 NEURL2Q9BR09 285 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 SEC22CQ9BRL7 303 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 MED20Q9H944 212 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 CHST11Q9NPF2 352 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 R4GN57 208 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 TTC3P53804 2025 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 NUP205Q92621 2012 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 GABRR1P24046 479 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 GUSBP11Q6P575 273 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 OLIG3Q7RTU3 272 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 KCNE4Q8WWG9 221 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 ZNF681Q96N22 645 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 SCAF4O95104 1147 aaKnown RBP14.78□□□□□ -0.04
USP42-207ENST00000521713 MTCP1P56278 107 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 OR56B1Q8NGI3 324 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 GABARAPL3Q9BY60 117 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 NDUFB11Q9NX14 153 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 IGHV1OR21-1A0A087WYE8 117 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 MSTNO14793 375 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 TAAR5O14804 337 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 AKR7A3O95154 331 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 HOXB5P09067 269 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 SHC1P29353 583 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 NDUFA6P56556 154 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 PLGLAQ15195 96 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 PCNPQ8WW12 178 aaKnown RBP14.77□□□□□ -0.04
USP42-207ENST00000521713 COL11A2P13942 1736 aaPredicted RBP14.77□□□□□ -0.04
USP42-207ENST00000521713 SMLR1H3BR10 107 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 UPK1AO00322 258 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 GLCEO94923 617 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 PPIAP62937 165 aaKnown RBP14.77□□□□□ -0.04
USP42-207ENST00000521713 GRB2P62993 217 aaKnown RBP14.77□□□□□ -0.04
USP42-207ENST00000521713 GLYR1Q49A26 553 aaPredicted RBP14.77□□□□□ -0.04
USP42-207ENST00000521713 DHRS13Q6UX07 377 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 PRICKLE2Q7Z3G6 844 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 YIPF6Q96EC8 236 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 ACKR4Q9NPB9 350 aa14.77□□□□□ -0.04
USP42-207ENST00000521713 K7EQS6 105 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 M0R082 166 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 MPPED1O15442 326 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 MAKP20794 623 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 NPSR1Q6W5P4 371 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 OR4K15Q8NH41 348 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 OR2A14Q96R47 310 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 MBOAT4Q96T53 435 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 DDOQ99489 341 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 MYOTQ9UBF9 498 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 COLQQ9Y215 455 aaPredicted RBP14.77□□□□□ -0.05
USP42-207ENST00000521713 XIRP1Q702N8 1843 aaKnown RBP14.77□□□□□ -0.05
USP42-207ENST00000521713 MMP11P24347 488 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 MDGA2Q7Z553 956 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 PRR18Q8N4B5 295 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 RBMXL1Q96E39 390 aaKnown RBP14.77□□□□□ -0.05
USP42-207ENST00000521713 C14orf79Q96F83 325 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 Q96M85 177 aa14.77□□□□□ -0.05
USP42-207ENST00000521713 TMEM127O75204 238 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 OR2J2O76002 312 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 PAPLNO95428 1278 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 TBC1D28Q2M2D7 210 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 OVCH1Q7RTY7 1134 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 KDM8Q8N371 416 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 C22orf15Q8WYQ4 148 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 MRGPRX4Q96LA9 322 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 C12orf57Q99622 126 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 EHFQ9NZC4 300 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 MYF5P13349 255 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 SERPINA2P20848 420 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 IL2RGP31785 369 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 RPS23P62266 143 aaKnown RBP14.76□□□□□ -0.05
USP42-207ENST00000521713 RAB1AP62820 205 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 CLPPQ16740 277 aaPredicted RBP14.76□□□□□ -0.05
USP42-207ENST00000521713 BBS1Q8NFJ9 593 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 DEFB127Q9H1M4 99 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 SCN4AP35499 1836 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 ETHE1O95571 254 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 MAP2K6P52564 334 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 SUMO3P55854 103 aaPredicted RBP14.76□□□□□ -0.05
USP42-207ENST00000521713 RNF4P78317 190 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 TOR2AQ5JU69 321 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 ZNF687Q8N1G0 1237 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 CLRN3Q8NCR9 226 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 OR13C9Q8NGT0 318 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 SPNS1Q9H2V7 528 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 A0A1W2PPC1 479 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 A0A1W2PPV4 95 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 CHRNB4P30926 498 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 RBM39Q14498 530 aaKnown RBP14.76□□□□□ -0.05
USP42-207ENST00000521713 FCRL6Q6DN72 434 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 MEX3BQ6ZN04 569 aaKnown RBP14.76□□□□□ -0.05
USP42-207ENST00000521713 PRR14Q9BWN1 585 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 OR11A1Q9GZK7 315 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 B3GAT1Q9P2W7 334 aa14.76□□□□□ -0.05
USP42-207ENST00000521713 PRELID3BQ9Y3B1 194 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms