RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 NRARPQ7Z6K4 114 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 GTPBP8Q8N3Z3 284 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 RNF175Q8N4F7 328 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 OR4M2Q8NGB6 313 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 OR2AJ1Q8NGZ0 328 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 OR2V1Q8NHB1 315 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 ADAMTS16Q8TE57 1224 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 GATAD1Q8WUU5 269 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 UBLCP1Q8WVY7 318 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 OSTF1Q92882 214 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 TMBIM1Q969X1 311 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 WDR34Q96EX3 536 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 CFAP36Q96G28 342 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 GPR21Q99679 349 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 ATG101Q9BSB4 218 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 TMEM109Q9BVC6 243 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 MS4A8Q9BY19 250 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 NSRP1Q9H0G5 558 aaKnown RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 RAB17Q9H0T7 212 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 GOLPH3Q9H4A6 298 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 EHD1Q9H4M9 534 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 RPF2Q9H7B2 306 aaKnown RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 NT5DC2Q9H857 520 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 LRRC40Q9H9A6 602 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 ANKRA2Q9H9E1 313 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 PARVBQ9HBI1 364 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 TMBIM4Q9HC24 238 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 HHATLQ9HCP6 504 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 FAM120CQ9NX05 1096 aaKnown RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 MAT2BQ9NZL9 334 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 MYEF2Q9P2K5 600 aaKnown RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 RHCGQ9UBD6 479 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 DKKL1Q9UK85 242 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 POU2F3Q9UKI9 436 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 CES1P1Q9UKY3 287 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 SLC22A14Q9Y267 594 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 MRPS33Q9Y291 106 aaKnown RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 FAT1Q14517 4588 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 RNF213Q63HN8 5207 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 IGKV2D-30A0A075B6S6 120 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 IGHV3OR16-10A0A075B7F0 116 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 A0A0A6YYD5 115 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 IGHV3-15A0A0B4J1V0 119 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 MAGEA13PA6NCF6 341 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF716A6NP11 495 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 MIF4GDA9UHW6 222 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 C9JVG2 144 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 ANKRD28O15084 1053 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 CTDSPLO15194 276 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 RGS14O43566 566 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 MT-ATP6P00846 226 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 KRT14P02533 472 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 LCATP04180 440 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 YES1P07947 543 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 SBK2P0C263 348 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 C1GALT1C1LP0DN25 315 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 G6PDP11413 515 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 CD1DP15813 335 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 IGLL1P15814 213 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 ZNF12P17014 697 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 LBPP18428 481 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 NT5EP21589 574 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 MPZP25189 248 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 AZGP1P25311 298 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 CTNNA2P26232 953 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 CD80P33681 288 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 GCKP35557 465 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 RPL4P36578 427 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 PPICP45877 212 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 GPR6P46095 362 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 CDX1P47902 265 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 RFX3P48380 749 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 TMED10P49755 219 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 HNMTP50135 292 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 CDKN2DP55273 166 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 STXBP1P61764 594 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 SNRPD2P62316 118 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 PAX8Q06710 450 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 IFT88Q13099 833 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 DHX34Q14147 1143 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 TFDP2Q14188 446 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 RBBP5Q15291 538 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 MAPK11Q15759 364 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 ZKSCAN8Q15776 578 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 KCTD19Q17RG1 926 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 TRMT12Q53H54 448 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 TMEM255AQ5JRV8 349 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 PIK3CD-AS1Q5SR53 167 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 C6orf10Q5SRN2 563 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 NEPROQ6NW34 567 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 TMIGD1Q6UXZ0 262 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 TMPRSS11FQ6ZWK6 438 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 SHFQ7M4L6 423 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 TMPRSS11BQ86T26 416 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 PRUNE1Q86TP1 453 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 GPR180Q86V85 440 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 LRP11Q86VZ4 500 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 THOC6Q86W42 341 aaKnown RBP3.14□□□□□ -1.91
VPS13B-208ENST00000521037 WDFY1Q8IWB7 410 aa3.14□□□□□ -1.91
VPS13B-208ENST00000521037 PNLDC1Q8NA58 520 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms