RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 CRCT1Q9UGL9 99 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 MRPS18BQ9Y676 258 aaKnown RBP1.85□□□□□ -2.11
SKP1-207ENST00000520417 ATAD2BQ9ULI0 1458 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 NLRC5Q86WI3 1866 aa1.85□□□□□ -2.11
SKP1-207ENST00000520417 SYNJ2BP-COX16A0A087WUM0 186 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 IGHV3-74A0A0B4J1X5 117 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 TMEM223A0PJW6 202 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 A8MUU9 505 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 H0Y8G0 127 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 H0YHG0 523 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 CDC7O00311 574 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 EEDO75530 441 aaKnown RBP1.84□□□□□ -2.11
SKP1-207ENST00000520417 UTS2O95399 124 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 CLIC3O95833 236 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 NDUFB10O96000 172 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 HLA-DPB1P04440 258 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 OR56A5P0C7T3 313 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 IGHV1-8P0DP01 117 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 HRH1P35367 487 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 MAS1LP35410 378 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 TAGLN2P37802 199 aaKnown RBP1.84□□□□□ -2.11
SKP1-207ENST00000520417 CEACAM6P40199 344 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 RFX3P48380 749 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 SULT1E1P49888 294 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 MAB21L1Q13394 359 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 TAF9Q16594 264 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 POU2AF1Q16633 256 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 RABL6Q3YEC7 729 aaPredicted RBP1.84□□□□□ -2.11
SKP1-207ENST00000520417 PTPN20Q4JDL3 420 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 FAM78AQ5JUQ0 283 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 ANKRD22Q5VYY1 191 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 TMEM107Q6UX40 140 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 HDDC2Q7Z4H3 204 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 PRSS58Q8IYP2 241 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 STPG2Q8N412 459 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 B3GNT7Q8NFL0 401 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 OR2L3Q8NG85 312 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 OR10R2Q8NGX6 335 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 KCNG3Q8TAE7 436 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 ZNF502Q8TBZ5 544 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 SLC7A13Q8TCU3 470 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 LKAAEAR1Q8TD35 194 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 GPR151Q8TDV0 419 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 ZNF606Q8WXB4 792 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 CREB3L1Q96BA8 519 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 CCDC126Q96EE4 140 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 NEURL3Q96EH8 262 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 SERPINB12Q96P63 405 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 CHAC1Q9BUX1 264 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 PKIBQ9C010 78 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 ISYNA1Q9NPH2 558 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 FAM49BQ9NUQ9 324 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 UVRAGQ9P2Y5 699 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 LSM7Q9UK45 103 aaKnown RBP1.84□□□□□ -2.11
SKP1-207ENST00000520417 ING4Q9UNL4 249 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 GOLT1BQ9Y3E0 138 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 ASB3Q9Y575 518 aa1.84□□□□□ -2.11
SKP1-207ENST00000520417 CNTNAP1P78357 1384 aa1.84□□□□□ -2.12
SKP1-207ENST00000520417 IGKV2-24A0A0C4DH68 120 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 ZNF816-ZNF321PA0A0X1KG74 233 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 PALMO75781 387 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 CST1P01037 141 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 GNAO1P09471 354 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 TROVE2P10155 538 aaKnown RBP eCLIP1.83□□□□□ -2.12
SKP1-207ENST00000520417 CSNK1A1P48729 337 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 SSR4P51571 173 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 CCNHP51946 323 aaPredicted RBP1.83□□□□□ -2.12
SKP1-207ENST00000520417 ARG2P78540 354 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 ZNF816Q0VGE8 651 aaPredicted RBP1.83□□□□□ -2.12
SKP1-207ENST00000520417 THEM4Q5T1C6 240 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 TEX43Q6ZNM6 134 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 NIPA1Q7RTP0 329 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 MS4A15Q8N5U1 240 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 NECAP1Q8NC96 275 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 OR1S2Q8NGQ3 325 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 AKR7LQ8NHP1 331 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 CNDP1Q96KN2 507 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 WFIKKN1Q96NZ8 548 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 PARP12Q9H0J9 701 aaKnown RBP1.83□□□□□ -2.12
SKP1-207ENST00000520417 CTSFQ9UBX1 484 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 ZNF230Q9UIE0 474 aaPredicted RBP1.83□□□□□ -2.12
SKP1-207ENST00000520417 HPCAL4Q9UM19 191 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 STARD10Q9Y365 291 aa1.83□□□□□ -2.12
SKP1-207ENST00000520417 SMCO2A6NFE2 343 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 LRRIQ3A6PVS8 624 aaPredicted RBP1.82□□□□□ -2.12
SKP1-207ENST00000520417 AIM2O14862 343 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 DPM1O60762 260 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 CIB2O75838 187 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 BCHEP06276 602 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 ANXA5P08758 320 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 CT62P0C5K7 136 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 ZNF24P17028 368 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 KIR3DL2P43630 455 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 CDC20Q12834 499 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 NTM-AS1Q6ZSK4 140 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 TAS2R42Q7RTR8 314 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 BHLHA15Q7RTS1 189 aaPredicted RBP1.82□□□□□ -2.12
SKP1-207ENST00000520417 FAM228AQ86W67 206 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 SLC22A9Q8IVM8 553 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 OR5B3Q8NH48 314 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms