RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 RIPPLY2Q5TAB7 128 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 AP1ARQ63HQ0 302 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 GPR139Q6DWJ6 353 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 ARSKQ6UWY0 536 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 EIF3MQ7L2H7 374 aaKnown RBP6.03□□□□□ -1.44
SDCBP-208ENST00000520228 CHMP1BQ7LBR1 199 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 OLIG3Q7RTU3 272 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 LACC1Q8IV20 430 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 ANKFN1Q8N957 763 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 PAPD5Q8NDF8 572 aaKnown RBP6.03□□□□□ -1.44
SDCBP-208ENST00000520228 DMBX1Q8NFW5 382 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 OR5M1Q8NGP8 315 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 LILRB4Q8NHJ6 448 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 ZPLD1Q8TCW7 415 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 ZFP90Q8TF47 636 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 AURKBQ96GD4 344 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-208ENST00000520228 ZNF583Q96ND8 569 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 MTHFD2LQ9H903 347 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-208ENST00000520228 CALHM2Q9HA72 323 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 TPT1P8Q9HAU6 139 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 MED17Q9NVC6 651 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 RNF6Q9Y252 685 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 ZNF337Q9Y3M9 751 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 WDR45Q9Y484 360 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 KLF2Q9Y5W3 355 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-208ENST00000520228 SPTBN1Q01082 2364 aaKnown RBP6.03□□□□□ -1.44
SDCBP-208ENST00000520228 SVILO95425 2214 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 NAV2Q8IVL1 2488 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 CENPEQ02224 2701 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 NOTCH2Q04721 2471 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 A0A1W2PP18 115 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF264O43296 627 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 EIF4E2O60573 245 aaKnown RBP6.02□□□□□ -1.45
SDCBP-208ENST00000520228 UGT2B17O75795 530 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 NUDT14O95848 222 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 CSTAP01040 98 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 CRYAAP02489 173 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF708P17019 499 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF17P17021 662 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 EIF1P41567 113 aaKnown RBP6.02□□□□□ -1.45
SDCBP-208ENST00000520228 P2RX1P51575 399 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 CLDN18P56856 261 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF117Q03924 483 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 FUT5Q11128 374 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 GNA13Q14344 377 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 MAPK14Q16539 360 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 SYPL1Q16563 259 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 TMEM44Q2T9K0 475 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 NDUFAF6Q330K2 333 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 CBLN3Q6UW01 205 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 FRRS1Q6ZNA5 592 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 LRRC74BQ6ZQY2 392 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 KRT74Q7RTS7 529 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 UBQLNLQ8IYU4 475 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF619Q8N2I2 560 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 GTPBP8Q8N3Z3 284 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-208ENST00000520228 TMCO5AQ8N6Q1 288 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 OR5W2Q8NH69 310 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 LAT2Q9GZY6 243 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF385DQ9H6B1 395 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 CHST11Q9NPF2 352 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 KCNJ16Q9NPI9 418 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 SLC52A3Q9NQ40 469 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 MRGBPQ9NV56 204 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 THUMPD1Q9NXG2 353 aaKnown RBP6.02□□□□□ -1.45
SDCBP-208ENST00000520228 CALML5Q9NZT1 146 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 P2RX2Q9UBL9 471 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 ICAM5Q9UMF0 924 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 NDUFAF1Q9Y375 327 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 AP4B1Q9Y6B7 739 aa6.02□□□□□ -1.45
SDCBP-208ENST00000520228 hCG_1809904A0A1W2PP81 198 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 A0A1W2PPE2 198 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 A0A1W2PR64 198 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 EVPLLA8MZ36 301 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 H0YC42 278 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 P2RY10O00398 339 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 ANGPT2O15123 496 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 TOXO94900 526 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 OPN1LWP04000 364 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 DBIP07108 87 aaKnown RBP6.01□□□□□ -1.45
SDCBP-208ENST00000520228 TFPTP0C1Z6 253 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 LINGO3P0C6S8 592 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 UBTFL6P0CB48 400 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-208ENST00000520228 CD1EP15812 388 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 PAX1P15863 534 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 PPIBP23284 216 aaKnown RBP6.01□□□□□ -1.45
SDCBP-208ENST00000520228 ME2P23368 584 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 CEACAM8P31997 349 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-208ENST00000520228 TIMP3P35625 211 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 CCR4P51679 360 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 TPD52P55327 224 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-208ENST00000520228 DSTNP60981 165 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 KCNJ10P78508 379 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 FADDQ13158 208 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 SKP2Q13309 424 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 QPRTQ15274 297 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 RGNQ15493 299 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 PLPPR5Q32ZL2 321 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 PAGE3Q5JUK9 113 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 CGB2Q6NT52 195 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms