RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	FAM47DP	A6NHR8	397 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	SNTN	A6NMZ2	147 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	DNASE2	O00115	360 aa	Predicted RBP	0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	UBXN8	O00124	270 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	HAS3	O00219	553 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	ANGPT2	O15123	496 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	SCGN	O76038	276 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	IGLV3-25	P01717	112 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	FGG	P02679	453 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	C2	P06681	752 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	SSTR5	P35346	364 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	UGT2B15	P54855	530 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	GPX6	P59796	221 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	SEC61G	P60059	68 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	RBX1	P62877	108 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	IFT88	Q13099	833 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	PIGH	Q14442	188 aa	Predicted RBP	0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	ARHGAP19	Q14CB8	494 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	RNASE13	Q5GAN3	156 aa	Known RBP	0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	FAM83F	Q8NEG4	500 aa	Predicted RBP	0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	OR13G1	Q8NGZ3	307 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	SLC25A46	Q96AG3	418 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	MRGPRF	Q96AM1	343 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	PIK3IP1	Q96FE7	263 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	RPRD1A	Q96P16	312 aa	Predicted RBP	0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	TIMM17A	Q99595	171 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	SAMSN1	Q9NSI8	373 aa	Known RBP	0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	KLHL28	Q9NXS3	571 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	CTSF	Q9UBX1	484 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	ADGRL1	O94910	1474 aa		0.91	□□□□□ -2.26
PCM1-208	ENST00000518877	DENND4A	Q7Z401	1863 aa		0.9	□□□□□ -2.26
PCM1-208	ENST00000518877	ZNF816-ZNF321P	A0A0X1KG74	233 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877		L7N2F9	121 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	PPP1R2P9	O14990	202 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	H6PD	O95479	791 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	TMEM50A	O95807	157 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	OR5H8	P0DN80	308 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	CALM1	P0DP23	149 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	CALM2	P0DP24	149 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	CALM3	P0DP25	149 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	DTYMK	P23919	212 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	EPS15	P42566	896 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	CCNG1	P51959	295 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	SLC25A11	Q02978	314 aa	Known RBP	0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	CDH17	Q12864	832 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	FAM53B	Q14153	422 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	EXOC3L2	Q2M3D2	409 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	STUM	Q69YW2	141 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	TMEM136	Q6ZRR5	245 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877		Q6ZSR3	168 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	ZNF101	Q8IZC7	436 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	MS4A15	Q8N5U1	240 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	SPANXA2-OT1	Q8N9U9	137 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	C1orf64	Q8NEQ6	169 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	OR4F6	Q8NGB9	312 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	OR10AD1	Q8NGE0	317 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	OR1S2	Q8NGQ3	325 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	LILRB4	Q8NHJ6	448 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	DUS3L	Q96G46	650 aa	Known RBP	0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	LZTS2	Q9BRK4	669 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	SHANK2-AS3	Q9BTD1	123 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	GON7	Q9BXV9	100 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	C8orf17	Q9NRJ1	99 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	DDX19A	Q9NUU7	478 aa	Known RBP	0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	SLC7A8	Q9UHI5	535 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	SNX6	Q9UNH7	406 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	PEX16	Q9Y5Y5	336 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	NPTN	Q9Y639	398 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	AP1M2	Q9Y6Q5	423 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	TRIP11	Q15643	1979 aa		0.9	□□□□□ -2.27
PCM1-208	ENST00000518877	TMEM120B	A0PK00	339 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	ZNF878	C9JN71	531 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	POLR1C	O15160	346 aa	Predicted RBP	0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	ZNF208	O43345	1280 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	ERLIN2	O94905	339 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	TSPAN12	O95859	305 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	HSD17B2	P37059	387 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	CEACAM3	P40198	252 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	PSMD8	P48556	350 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	TAS2R31	P59538	309 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	CLINT1	Q14677	625 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	ORMDL2	Q53FV1	153 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	EFL1	Q7Z2Z2	1120 aa	Known RBP	0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	TMEM135	Q86UB9	458 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	EGFL6	Q8IUX8	553 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	LRRC75A-AS1	Q8N1F1	130 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	METTL13	Q8N6R0	699 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	STEAP2	Q8NFT2	490 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	OR8J1	Q8NGP2	316 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	SYAP1	Q96A49	352 aa	Predicted RBP	0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	PTX4	Q96A99	478 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	TVP23C	Q96ET8	276 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	SERPINB12	Q96P63	405 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	PARP12	Q9H0J9	701 aa	Known RBP	0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	ZNF639	Q9UID6	485 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	LSM7	Q9UK45	103 aa	Known RBP	0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	ING4	Q9UNL4	249 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	SAMHD1	Q9Y3Z3	626 aa	Known RBP	0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	BAHCC1	Q9P281	2608 aa		0.89	□□□□□ -2.27
PCM1-208	ENST00000518877	PLXNB1	O43157	2135 aa		0.88	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms