RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 VAPAQ9P0L0 249 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 P2RX2Q9UBL9 471 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 PEF1Q9UBV8 284 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 FBXL2Q9UKC9 423 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ABCG2Q9UNQ0 655 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ARL2BPQ9Y2Y0 163 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 SLC6A5Q9Y345 797 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 RHBDD3Q9Y3P4 386 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 WDR45Q9Y484 360 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 SCN2AQ99250 2005 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 NUP210LQ5VU65 1888 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 MED13Q9UHV7 2174 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 SERINC4A6NH21 518 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 CLDN24A6NM45 220 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ANKRD30BLA7E2S9 258 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 BBIP1A8MTZ0 92 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 FBP2O00757 339 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 NDUFAB1O14561 156 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 PLPP2O43688 288 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ZIC3O60481 467 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 EIF4E2O60573 245 aaKnown RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 HCN1O60741 890 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 UGT2B17O75795 530 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 SERPINI2O75830 405 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 DCTN3O75935 186 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ZFPL1O95159 310 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 OR6A2O95222 327 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 FAM107AO95990 144 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 LDLRP01130 860 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 MBP02144 154 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 OPN1LWP04000 364 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 NGFRP08138 427 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ELANEP08246 267 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 RPSAP08865 295 aaKnown RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 HOXB5P09067 269 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 TFPTP0C1Z6 253 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 DANCRP0C864 163 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ANPEPP15144 967 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 AQP1P29972 269 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 PPIFP30405 207 aaKnown RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 SRD5A2P31213 254 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 PRDX2P32119 198 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 LIPAP38571 399 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 RPS19P39019 145 aaKnown RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 ALDH3B1P43353 468 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 NUDT2P50583 147 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 TDGF1P3P51864 188 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 CRISP3P54108 245 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 GAS1P54826 345 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 MTCP1P56278 107 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 SELENOVP59797 346 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 CBX1P83916 185 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 BDH1Q02338 343 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 MAB21L1Q13394 359 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 SELPLGQ14242 412 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 GPR176Q14439 515 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 CD226Q15762 336 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ZNF141Q15928 474 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 MAPK14Q16539 360 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 C3AR1Q16581 482 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ZNF630Q2M218 657 aaPredicted RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 CTU2Q2VPK5 515 aaKnown RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 NDUFAF6Q330K2 333 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 PLAC9Q5JTB6 97 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 FNDC7Q5VTL7 733 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 RAET1LQ5VY80 246 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 TYW3Q6IPR3 259 aaKnown RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 NANOGP8Q6NSW7 305 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 REEP3Q6NUK4 255 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 FRRS1Q6ZNA5 592 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 LRRC74BQ6ZQY2 392 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 RHOUQ7L0Q8 258 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 MEPCEQ7L2J0 689 aaKnown RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 CHMP1BQ7LBR1 199 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 IFNEQ86WN2 208 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 DOLPP1Q86YN1 238 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 STHQ8IWL8 128 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 MSRB3Q8IXL7 192 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 GCNT2Q8N0V5 402 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 GPR137CQ8N3F9 429 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 FAM86B1Q8N7N1 296 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 BOLLQ8N9W6 283 aaKnown RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 CCDC197Q8NCU1 140 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 CHDHQ8NE62 594 aaPredicted RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 OR2M3Q8NG83 312 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 OR10Q1Q8NGQ4 319 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 OR6S1Q8NH40 331 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 OR52P1PQ8NH57 321 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 OR10A6Q8NH74 314 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ZNF563Q8TA94 476 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 NEIL3Q8TAT5 605 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 FAM57AQ8TBR7 257 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 SLC38A5Q8WUX1 472 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 SMPDL3BQ92485 455 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 SARAFQ96BY9 339 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 LRRC58Q96CX6 371 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ZG16BQ96DA0 208 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 SLC47A1Q96FL8 570 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 TMEM19Q96HH6 336 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 SFXN2Q96NB2 322 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms