RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 MAGEB18Q96M61 343 aa9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 SIGLEC11Q96RL6 698 aa9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 PAIP2Q9BPZ3 127 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 CHIAQ9BZP6 476 aa9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 ELOVL3Q9HB03 270 aa9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 SLCO1B3Q9NPD5 702 aa9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 STX18Q9P2W9 335 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 IL19Q9UHD0 177 aa9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZNF229Q9UJW7 825 aa9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 PPP1R3CQ9UQK1 317 aa9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 RNF114Q9Y508 228 aa9.61□□□□□ -0.87
TRAPPC9-203ENST00000517667 LOC100509620A0A075B734 347 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 A0A1W2PRG6 482 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 GMNCA6NCL1 334 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 MCIDASD6RGH6 385 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 IFNL4K9M1U5 179 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 NDUFAB1O14561 156 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 TPST1O60507 370 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 FMO6PO60774 539 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 SERPINB7O75635 380 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 CLPXO76031 633 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 HIST1H2ABP04908 130 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 WNT2P09544 360 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 NR2C1P13056 603 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 RPS2P15880 293 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZNF32P17041 273 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 GSTM3P21266 225 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 TUBG1P23258 451 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 EPHA3P29320 983 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 GYS2P54840 703 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 GNB2P62879 340 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 GUCY1A3Q02108 690 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 C2orf68Q2NKX9 166 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZNF774Q6NX45 483 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 LINC00114Q6XXX2 140 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 BRD3OSQ6XYD6 125 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZNF620Q6ZNG0 422 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 HIST3H2AQ7L7L0 130 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 POU5F2Q8N7G0 328 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 NFKBIDQ8NI38 313 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 DYRK2Q92630 601 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 HIST1H2ACQ93077 130 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZNF347Q96SE7 839 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZNF607Q96SK3 696 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 SEPHS2Q99611 448 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 MRPL13Q9BYD1 178 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 MARCH7Q9H992 704 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 SMURF2Q9HAU4 748 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 TCF7L1Q9HCS4 588 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 TUBG2Q9NRH3 451 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 MAN2C1Q9NTJ4 1040 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 PNPOQ9NVS9 261 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZIM2Q9NZV7 527 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 KIF17Q9P2E2 1029 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 ASH2LQ9UBL3 628 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 SOX21Q9Y651 276 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 DOCK11Q5JSL3 2073 aa9.6□□□□□ -0.87
TRAPPC9-203ENST00000517667 TPST2O60704 377 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 FAM107AO95990 144 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 CH25HO95992 272 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 ASAH2BP0C7U1 165 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 DAP3P51398 398 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 POLR2JP52435 117 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZNF133P52736 654 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 CDK6Q00534 326 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 STX3Q13277 289 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 TAF11Q15544 211 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 GCNT6Q5T4J0 391 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 TTC33Q6PID6 262 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 NLRC3Q7RTR2 1065 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 NANOGNBQ7Z5D8 188 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 NPEPL1Q8NDH3 523 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 OR2Z1Q8NG97 314 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 BCAS4Q8TDM0 211 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 SSMEM1Q8WWF3 244 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 DACT3Q96B18 629 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 PAIP1Q9H074 479 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 SDR39U1Q9NRG7 319 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 TNFRSF19Q9NS68 423 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 MIOXQ9UGB7 285 aa9.59□□□□□ -0.87
TRAPPC9-203ENST00000517667 KMT2CQ8NEZ4 4911 aaKnown RBP9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 KIR2DS1A0A191URI9 304 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 C5orf63A6NC05 138 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 C3orf80F5H4A9 247 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 TMEM178BH3BS89 294 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 HDAC3O15379 428 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 PIN1P1O15428 100 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 TSPAN15O95858 294 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 MELTFP08582 738 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 UMPSP11172 480 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 ACADSP16219 412 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 BGNP21810 368 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 PPIBP23284 216 aaKnown RBP9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 SLC6A2P23975 617 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 KRTAP10-3P60369 221 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 PCBD1P61457 104 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 ERVK-25P63136 954 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 PSG4Q00888 419 aa9.58□□□□□ -0.88
TRAPPC9-203ENST00000517667 PSG7Q13046 419 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms