RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 A0A1W2PPC1 479 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 PRSS44E7EML9 344 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 H0Y8X5 98 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 GMFGO60234 142 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 SSBP1Q04837 148 aaKnown RBP11.15□□□□□ -0.62
PCM1-203ENST00000517545 EGR4Q05215 589 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 EGR3Q06889 387 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 GPR18Q14330 331 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 TMEM225Q6GV28 225 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 CBLN3Q6UW01 205 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 MDGA2Q7Z553 956 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 INO80EQ8NBZ0 244 aaPredicted RBP11.15□□□□□ -0.62
PCM1-203ENST00000517545 GLYATL2Q8WU03 294 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 SLC22A18Q96BI1 424 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 MMP25Q9NPA2 562 aa11.15□□□□□ -0.62
PCM1-203ENST00000517545 MEX3AA1L020 520 aaKnown RBP11.15□□□□□ -0.63
PCM1-203ENST00000517545 TNFSF14O43557 240 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 SLC35E2P0CK97 266 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 CFPP27918 469 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 HTR2CP28335 458 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 ACTR1BP42025 376 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 PRMT2P55345 433 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 ACTR1AP61163 376 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 CXADRP78310 365 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 MFGE8Q08431 387 aaPredicted RBP11.15□□□□□ -0.63
PCM1-203ENST00000517545 PMPCAQ10713 525 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 OR52W1Q6IF63 320 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 LPCAT3Q6P1A2 487 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 TMPPEQ6ZT21 453 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 SPAG16Q8N0X2 631 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 GVQW1Q8N7I0 195 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 ACBD4Q8NC06 268 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 OR9A4Q8NGU2 314 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 RXFP4Q8TDU9 374 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 TMED6Q8WW62 240 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 TSACCQ96A04 125 aaPredicted RBP11.15□□□□□ -0.63
PCM1-203ENST00000517545 KTI12Q96EK9 354 aaPredicted RBP11.15□□□□□ -0.63
PCM1-203ENST00000517545 CPNE2Q96FN4 548 aaPredicted RBP11.15□□□□□ -0.63
PCM1-203ENST00000517545 CMKLR1Q99788 373 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 TREM1Q9NP99 234 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 ZMAT5Q9UDW3 170 aaKnown RBP11.15□□□□□ -0.63
PCM1-203ENST00000517545 FAM96BQ9Y3D0 163 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 REV3LO60673 3130 aa11.15□□□□□ -0.63
PCM1-203ENST00000517545 FGF16O43320 207 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 HLA-DQA2P01906 255 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 CENPAP49450 140 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 RPS21P63220 83 aaKnown RBP11.14□□□□□ -0.63
PCM1-203ENST00000517545 ERV3-1Q14264 604 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 KIR2DS3Q14952 304 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 PDGFRLQ15198 375 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 CD226Q15762 336 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 PAPD4Q6PIY7 484 aaKnown RBP11.14□□□□□ -0.63
PCM1-203ENST00000517545 LYG2Q86SG7 212 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 OR1M1Q8NGA1 313 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 PATE1Q8WXA2 126 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 CMBLQ96DG6 245 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 PIK3IP1Q96FE7 263 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 ZC3H10Q96K80 434 aaKnown RBP11.14□□□□□ -0.63
PCM1-203ENST00000517545 MYOZ1Q9NP98 299 aaPredicted RBP11.14□□□□□ -0.63
PCM1-203ENST00000517545 SLC17A5Q9NRA2 495 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 CHD9Q3L8U1 2897 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 A0A0B4J2A0 478 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 PQLC2LA1A4F0 135 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 KAT7O95251 611 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 PLGP00747 810 aaPredicted RBP11.14□□□□□ -0.63
PCM1-203ENST00000517545 CD74P04233 296 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 CT45A8P0DMV1 189 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 CT45A9P0DMV2 189 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 HOXB1P14653 301 aaPredicted RBP11.14□□□□□ -0.63
PCM1-203ENST00000517545 VAMP1P23763 118 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 PPP1CAP62136 330 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 IL13RA1P78552 427 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 ELOCQ15369 112 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 DEFB110Q30KQ9 67 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 CDNFQ49AH0 187 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 CT45A2Q5DJT8 189 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 FAM219AQ8IW50 185 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 SFTPA2Q8IWL1 248 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 BCORP1Q8N888 145 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 ADAD2Q8NCV1 583 aaKnown RBP11.14□□□□□ -0.63
PCM1-203ENST00000517545 OTOSQ8NHW6 89 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 SFT2D1Q8WV19 159 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 SEMA6CQ9H3T2 930 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 SLC22A11Q9NSA0 550 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 GDE1Q9NZC3 331 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 SHPKQ9UHJ6 478 aa11.14□□□□□ -0.63
PCM1-203ENST00000517545 ARHGEF17Q96PE2 2063 aaPredicted RBP11.14□□□□□ -0.63
PCM1-203ENST00000517545 C13orf42A0A1B0GVH6 325 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 C9orf170A2RU37 121 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 WIPF3A6NGB9 483 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 ZNF208O43345 1280 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 APOC1P02654 83 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 ASAH2BP0C7U1 165 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 RORAP35398 523 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 SPOCK1Q08629 439 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 EEF1A1P5Q5VTE0 462 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 ATG4DQ86TL0 474 aaPredicted RBP11.13□□□□□ -0.63
PCM1-203ENST00000517545 SLC25A42Q86VD7 318 aa11.13□□□□□ -0.63
PCM1-203ENST00000517545 PAQR4Q8N4S7 273 aaPredicted RBP11.13□□□□□ -0.63
PCM1-203ENST00000517545 CSNK1A1LQ8N752 337 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms