RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ATP6V1B2P21281 511 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 SPRP35270 261 aaPredicted RBP4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 MAGEA3P43357 314 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 DNASE1L1P49184 302 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 RPL31P62899 125 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 SLC10A7Q0GE19 358 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 CALCOCO2Q13137 446 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 DYNC1I2Q13409 638 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 UNC119Q13432 240 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 RGS21Q2M5E4 152 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 CNPY1Q3B7I2 92 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 MARCH8Q5T0T0 291 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 FAM72AQ5TYM5 149 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 FAM72DQ6L9T8 149 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 GDPGP1Q6ZNW5 385 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 SSX6Q7RTT6 188 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 FAM72BQ86X60 149 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 CBLN2Q8IUK8 224 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 C9orf40Q8IXQ3 194 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 LRRC52Q8N7C0 313 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 ZNF740Q8NDX6 193 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 ZNF738Q8NE65 137 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 NUP37Q8NFH4 326 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 OR5AR1Q8NGP9 310 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 OR6K6Q8NGW6 343 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 RNASEH2CQ8TDP1 164 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 TFB1MQ8WVM0 346 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 PGLYRP4Q96LB8 373 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 MCCC1Q96RQ3 725 aaPredicted RBP4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 CIB1Q99828 191 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 CCDC28BQ9BUN5 200 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 HES7Q9BYE0 225 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 PARLQ9H300 379 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 MUTYHQ9UIF7 546 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 COL22A1Q8NFW1 1626 aaPredicted RBP4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 ANKRD30BQ9BXX2 1392 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 PLB1Q6P1J6 1458 aa4.49□□□□□ -1.69
CTNNA1-202ENST00000517533 A0A0G2JRQ6 117 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 GOLGA6L10A6NI86 522 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 ERI2A8K979 691 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 FOXI3A8MTJ6 420 aaPredicted RBP4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 ERVV-1B6SEH8 477 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 F6UB75 175 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 PDHXO00330 501 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 NME4O00746 187 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 SULT1B1O43704 296 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 SNAP91O60641 907 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 FKBP6O75344 327 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 EIF3GO75821 320 aaKnown RBP eCLIP4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 GJB5O95377 273 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 SLC2A10O95528 541 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 TIMP1P01033 207 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 HOXC4P09017 264 aaPredicted RBP4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 PET100P0DJ07 73 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 CT45A10P0DMU9 189 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 ARR3P36575 388 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 RPL14P50914 215 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 SUB1P53999 127 aaKnown RBP eCLIP4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 CYCSP99999 105 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 ABRAXAS2Q15018 415 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 ZNF726P1Q15940 193 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 TFAP2EQ6VUC0 442 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 Q6ZN92 141 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 NRMQ8IXM6 262 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 AQP11Q8NBQ7 271 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 PHOSPHO2Q8TCD6 241 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 TAF15Q92804 592 aaKnown RBP eCLIP4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 PPP1R14BQ96C90 147 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 SCGB3A2Q96PL1 93 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 RBBP8Q99708 897 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 AGMATQ9BSE5 352 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 VCX3BQ9H321 246 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 TMBIM4Q9HC24 238 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 IFT46Q9NQC8 304 aa4.48□□□□□ -1.69
CTNNA1-202ENST00000517533 IGHV1OR21-1A0A087WYE8 117 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 SMIM28A0A1B0GU29 152 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 ANKRD20A5PA0PJZ0 165 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 GOLGA8IPA6NC78 632 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 RBMY1BA6NDE4 496 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 RBMY1EA6NEQ0 496 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 LYRM9A8MSI8 78 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 SEC14L6B5MCN3 397 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 SLC17A2O00624 439 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 GPR171O14626 319 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 ALOX12BO75342 701 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 DUS4LO95620 317 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 RBMY1DP0C7P1 496 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 RBMY1A1P0DJD3 496 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 LIPCP11150 499 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 RAB4AP20338 218 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 COILP38432 576 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 CDKN2CP42773 168 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 RAB7AP51149 207 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 RORCP51449 518 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 SNRPD1P62314 119 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 SLC10A1Q14973 349 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 ARL6IP1Q15041 203 aa4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 ZNHIT3Q15649 155 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-202ENST00000517533 ZBED5Q49AG3 693 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms