RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 A0A1W2PS18 150 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 PRR23AA6NEV1 266 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ANKRD63C9JTQ0 380 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 LOC110117498-PIK3R3F6TDL0 507 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 DFFAO00273 331 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 MPZL2O60487 215 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 HPGDSO60760 199 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 CIAO1O76071 339 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 GCGP01275 180 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 APOEP02649 317 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 KLK3P07288 261 aaPredicted RBP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 SELEP16581 610 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 TBPP20226 339 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 PVALBP20472 110 aaPredicted RBP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 RAP1GDS1P52306 607 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 SUB1P53999 127 aaKnown RBP eCLIP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 PROK1P58294 105 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ERVK-16P61578 105 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 HMGCS1Q01581 520 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 BCL2L1Q07817 233 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ST3GAL4Q11206 333 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 TFDP2Q14188 446 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 SLC1A5Q15758 541 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 MARCH8Q5T0T0 291 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 LINC00242Q5T6M2 205 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 GPRC6AQ5T6X5 926 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 OGFRL1Q5TC84 451 aaPredicted RBP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 FRMPD2BQ6IN97 320 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 SPOPLQ6IQ16 392 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 NIPAL1Q6NVV3 410 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 METTL7BQ6UX53 244 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 TFAP2EQ6VUC0 442 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 GGNQ86UU5 652 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZFAND4Q86XD8 727 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 FTMTQ8N4E7 242 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 TBC1D19Q8N5T2 526 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 NANOGP1Q8N7R0 232 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF557Q8N988 423 aaPredicted RBP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 TMEM178AQ8NBL3 297 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF680Q8NEM1 530 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 KLHDC9Q8NEP7 349 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 C11orf45Q8TAV5 145 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 DYNC2LI1Q8TCX1 351 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 C22orf15Q8WYQ4 148 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 HGDQ93099 445 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 PTH2Q96A98 100 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 RAD51AP1Q96B01 352 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 MED8Q96G25 268 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF488Q96MN9 340 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 GABRG3Q99928 467 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 AGMATQ9BSE5 352 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 BARHL1Q9BZE3 327 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 SCAND2PQ9GZW5 306 aaPredicted RBP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZCCHC4Q9H5U6 513 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 CAB39LQ9H9S4 337 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 RDH14Q9HBH5 336 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 EXOSC3Q9NQT5 275 aaKnown RBP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 C8orf4Q9NR00 106 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 DEPPQ9NTK1 212 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 BABAM2Q9NXR7 383 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 THYN1Q9P016 225 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 TMEM181Q9P2C4 612 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 Q9UF83 564 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF107Q9UII5 783 aaPredicted RBP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 STOML2Q9UJZ1 356 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 MGAT4AQ9UM21 535 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 SLC22A13Q9Y226 551 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ASF1AQ9Y294 204 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 NUP153P49790 1475 aaKnown RBP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 PBRM1Q86U86 1689 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 MN1Q10571 1320 aaPredicted RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 TDRD15B5MCY1 1934 aaKnown RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 SAA2-SAA4A0A096LPE2 208 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 KIR2DS1A0A191URI9 304 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 SMIM28A0A1B0GU29 152 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 A0A1B0GWB2 263 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 GJE1A6NN92 205 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 C9J4A7 227 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 F6UB75 175 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 C16orf97H3BN30 126 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 HAT1O14929 419 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 SLC31A1O15431 190 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 TGOLN2O43493 480 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 MGRN1O60291 552 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 CDC40O60508 579 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 MAGEC1O60732 1142 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 SHOX2O60902 331 aaPredicted RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 PROP1O75360 226 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 FRAT2O75474 233 aaPredicted RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 SCRG1O75711 98 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 EIF3GO75821 320 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 SLC2A10O95528 541 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ASS1P00966 412 aaKnown RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 HLA-AP01891 365 aaKnown RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 ARG1P05089 322 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 CALB1P05937 261 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 CD55P08174 381 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 IGFBP3P17936 291 aaPredicted RBP3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 CMA1P23946 247 aa3.25□□□□□ -1.89
RNU4-60P-201ENST00000517239 IDH2P48735 452 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms