RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ZNF678Q5SXM1 525 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 AVPI1Q5T686 147 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 OR2G6Q5TZ20 316 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 METTL21CQ5VZV1 264 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 CWC27Q6UX04 472 aaKnown RBP-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 Q6ZQT7 251 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 SZRD1Q7Z422 152 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 AMZ2Q86W34 360 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 AQP12AQ8IXF9 295 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 CPNE9Q8IYJ1 553 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 PI4KAP1Q8N8J0 262 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 OR4M1Q8NGD0 313 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 OR4D6Q8NGJ1 314 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 YIPF5Q969M3 257 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 EVI5LQ96CN4 794 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 RAB39BQ96DA2 213 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 C7orf26Q96N11 449 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 UTP14AQ9BVJ6 771 aaKnown RBP-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 ABCB9Q9NP78 766 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 KCNJ16Q9NPI9 418 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 EIF2B3Q9NR50 452 aaKnown RBP-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 ANAPC5Q9UJX4 755 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 ENTPD4Q9Y227 616 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 SLC22A7Q9Y694 548 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 PRRC2CQ9Y520 2896 aaKnown RBP-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 MYO18BQ8IUG5 2567 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 KDM5BQ9UGL1 1544 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 AKAP6Q13023 2319 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 CASP8AP2Q9UKL3 1982 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 SHROOM4Q9ULL8 1493 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 RAD54L2Q9Y4B4 1467 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 HIDE1A8MVS5 230 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 KRBOX1C9JBD0 128 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 KBTBD13C9JR72 458 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 E7ESA3 106 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 ARPC1BO15143 372 aaKnown RBP-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 PTP4A3O75365 173 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 FARS2O95363 451 aaKnown RBP-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 PGM3O95394 542 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 OPN1LWP04000 364 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 SNRPAP09012 282 aaKnown RBP-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 HBQ1P09105 142 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 RPA2P15927 270 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 GPX2P18283 190 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 NELFEP18615 380 aaKnown RBP-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 PRPHP41219 470 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 XKP51811 444 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 TAS2R43P59537 309 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 RGS1Q08116 209 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 ILKQ13418 452 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 CDO1Q16878 200 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 FAM104BQ5XKR9 115 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 PODNL1Q6PEZ8 512 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 ZNF773Q6PK81 442 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 C2orf91Q6ZV80 131 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 P4HA3Q7Z4N8 544 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 MOB3BQ86TA1 216 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 HS3ST5Q8IZT8 346 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 DYNAPQ8N1N2 210 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 TCTEX1D2Q8WW35 142 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 EEF1AKMT3Q96AZ1 226 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 SGK3Q96BR1 496 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 FAM120BQ96EK7 910 aaKnown RBP-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 HSD17B10Q99714 261 aaKnown RBP-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 MLPHQ9BV36 600 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 TBC1D10AQ9BXI6 508 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 OSBPL8Q9BZF1 889 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 ACTR6Q9GZN1 396 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 TAS2R5Q9NYW4 299 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 KCNIP1Q9NZI2 227 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 CRYL1Q9Y2S2 319 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 PLCH2O75038 1416 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 NPC1L1Q9UHC9 1359 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 TNIKQ9UKE5 1360 aa-2.12□□□□□ -2.75
RNU6-542P-201ENST00000516405 ITIH6Q6UXX5 1313 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 A0A0B4J2C4 111 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 TRBC2A0A5B9 178 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 SLC22A20A6NK97 555 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 ANKRD30BLA7E2S9 258 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 PRMT5O14744 637 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 COCHO43405 550 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 HIST1H2AGP0C0S8 130 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 OR5AC1P0C628 307 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 PSMB9P28065 219 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 PRDX2P32119 198 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 ZNF137PP52743 207 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 ATXN3P54252 364 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 GFERP55789 205 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 BDH1Q02338 343 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 CDH17Q12864 832 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 PRPSAP1Q14558 356 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 TMEM249Q2WGJ8 235 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 LGALS9BQ3B8N2 356 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 ZNF829Q3KNS6 432 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 C6orf52Q5T4I8 152 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 NOXRED1Q6NXP6 359 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 H3F3CQ6NXT2 135 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 CNIH2Q6PI25 160 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 CD164L2Q6UWJ8 174 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 FP248Q71RG6 208 aaPredicted RBP-2.13□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms