RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 TIMM21Q9BVV7 248 aa-1.21□□□□□ -2.6
SCARNA23-201ENST00000516060 MRPL9Q9BYD2 267 aaKnown RBP-1.21□□□□□ -2.6
SCARNA23-201ENST00000516060 TBL1XR1Q9BZK7 514 aa-1.21□□□□□ -2.6
SCARNA23-201ENST00000516060 COPS7BQ9H9Q2 264 aaPredicted RBP-1.21□□□□□ -2.6
SCARNA23-201ENST00000516060 AIPL1Q9NZN9 384 aa-1.21□□□□□ -2.6
SCARNA23-201ENST00000516060 DOK5Q9P104 306 aa-1.21□□□□□ -2.6
SCARNA23-201ENST00000516060 SLC7A11Q9UPY5 501 aa-1.21□□□□□ -2.6
SCARNA23-201ENST00000516060 BAZ1BQ9UIG0 1483 aaKnown RBP-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 TRAV19A0A0A6YYK7 116 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 CCDC182A6NF36 153 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 GPR89AB7ZAQ6 455 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 TOM1L1O75674 476 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 GPR89BP0CG08 455 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 ZNF43P17038 809 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 HCAR3P49019 387 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 SCRN3Q0VDG4 424 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 BTN1A1Q13410 526 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 CARTPTQ16568 116 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 KLHL40Q2TBA0 621 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 TMEM176BQ3YBM2 270 aaPredicted RBP-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 CARD16Q5EG05 197 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 C10orf91Q5T1B1 145 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 PEX26Q7Z412 305 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 GLRX5Q86SX6 157 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 METTL23Q86XA0 190 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 METTL13Q8N6R0 699 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 CEP112Q8N8E3 955 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 FNDC5Q8NAU1 212 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 OR8K1Q8NGG5 319 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 UBE2E3Q969T4 207 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 RAD51AP1Q96B01 352 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 PDCD1LG2Q9BQ51 273 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 EDEM2Q9BV94 578 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 FTHL17Q9BXU8 183 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 DPH5Q9H2P9 285 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 RBKSQ9H477 322 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 AKIRIN1Q9H9L7 192 aaPredicted RBP-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 THUMPD1Q9NXG2 353 aaKnown RBP-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 RWDD2AQ9UIY3 292 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 MRPS16Q9Y3D3 137 aaKnown RBP-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 SLIT2O94813 1529 aa-1.22□□□□□ -2.6
SCARNA23-201ENST00000516060 IGLV3-22A0A075B6J6 115 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 A0A0B4J2A0 478 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 A0A1B0GU33 70 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 KRBOX1C9JBD0 128 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 IGHV1-46P01743 117 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 RORAP35398 523 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 SNU13P55769 128 aaKnown RBP-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 UBE2NP61088 152 aaKnown RBP-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 CDK16Q00536 496 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 OGDHQ02218 1023 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 LIPEQ05469 1076 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 ZSCAN26Q16670 478 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 AARDQ4LEZ3 155 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 SLC30A6Q6NXT4 461 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 DLEU7Q6UYE1 221 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 MSRB3Q8IXL7 192 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 EID2Q8N6I1 236 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 ACOT4Q8N9L9 421 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 HSD17B11Q8NBQ5 300 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 OR4M1Q8NGD0 313 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 NTAN1Q96AB6 310 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 OXGR1Q96P68 337 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 SIRPDQ9H106 197 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 RPF2Q9H7B2 306 aaKnown RBP-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 SUN2Q9UH99 717 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 SHPKQ9UHJ6 478 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 COPS3Q9UNS2 423 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 HERC1Q15751 4861 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 LOXHD1Q8IVV2 1947 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 CAMTA1Q9Y6Y1 1673 aa-1.23□□□□□ -2.61
SCARNA23-201ENST00000516060 ALPK2Q86TB3 2170 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 CLRN2A0PK11 232 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 P4HA2O15460 535 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 CRTAPO75718 401 aaPredicted RBP-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 KCNK2O95069 426 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 ETHE1O95571 254 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 IGHV3-53P01767 116 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 RPN2P04844 631 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 TCN1P20061 433 aaPredicted RBP-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 PGCP20142 388 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 TPSB2P20231 275 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 BLVRBP30043 206 aaPredicted RBP-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 GFERP55789 205 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 PSG4Q00888 419 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 OXA1LQ15070 435 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 TPSAB1Q15661 275 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 MEP1BQ16820 701 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 THEM4Q5T1C6 240 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 SPECC1LQ69YQ0 1117 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 LGALS9CQ6DKI2 356 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 COA5Q86WW8 74 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 SERPINA12Q8IW75 414 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 Q8NAQ8 132 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 OR5AU1Q8NGC0 362 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 OR52N1Q8NH53 320 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 URGCPQ8TCY9 931 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 MED8Q96G25 268 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 C12orf66Q96MD2 445 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms