RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 STK11Q15831 433 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 ZNF79Q15937 498 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 ABLIM2Q6H8Q1 611 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SPINK14Q6IE38 97 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SLC25A25Q6KCM7 469 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SFXN4Q6P4A7 337 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 YRDCQ86U90 279 aaKnown RBP7.44□□□□□ -1.22
RNF4-220ENST00000513578 NR2C2APQ86WQ0 139 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 CATSPERDQ86XM0 798 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 LURAP1LQ8IV03 231 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SULF2Q8IWU5 870 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 LAX1Q8IWV1 398 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 TMEM123Q8N131 208 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 CENPSQ8N2Z9 138 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 PRSS35Q8N3Z0 413 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 GALNT16Q8N428 558 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 OR10H5Q8NGA6 315 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 OR9K2Q8NGE7 335 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 OR2V1Q8NHB1 315 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SETD6Q8TBK2 473 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 GPR148Q8TDV2 347 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 C11orf40Q8WZ69 217 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 HAS2Q92819 552 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 MCHR2Q969V1 340 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 PNPLA2Q96AD5 504 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SCMH1Q96GD3 660 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SFXN2Q96NB2 322 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SIGLEC12Q96PQ1 595 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 PDCD1LG2Q9BQ51 273 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 EMC6Q9BV81 110 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 TTTY10Q9BZA0 68 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 NIPAL2Q9H841 368 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 TIGARQ9NQ88 270 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 PAQR5Q9NXK6 330 aaPredicted RBP7.44□□□□□ -1.22
RNF4-220ENST00000513578 ANKRD10Q9NXR5 420 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 GLTPQ9NZD2 209 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 R4GMQ9 66 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 GVINP1Q7Z2Y8 2422 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 MED12Q93074 2177 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 CACNA1CQ13936 2221 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 FABP12A6NFH5 140 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 ZNF716A6NP11 495 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 NPIPA2E9PIF3 369 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 NPIPA3F8WFD2 350 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 KLRC4-KLRK1H3BQV0 150 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 PSMD9O00233 223 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 CYTIPO60759 359 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 TPPPO94811 219 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 RPP14O95059 124 aaKnown RBP7.43□□□□□ -1.22
RNF4-220ENST00000513578 MPZL1O95297 269 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 PTTG1O95997 202 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 OPN1LWP04000 364 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 QDPRP09417 244 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 EPXP11678 715 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 NPR2P20594 1047 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 TCEA1P23193 301 aaKnown RBP7.43□□□□□ -1.22
RNF4-220ENST00000513578 CTSSP25774 331 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 CSNK1A1P48729 337 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 MMP16P51512 607 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 CAV3P56539 151 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 CLDN17P56750 224 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 CARD18P57730 90 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 HIST1H3AP68431 136 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 CAMK2DQ13557 499 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 WDR38Q5JTN6 314 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 WIPI1Q5MNZ9 446 aaPredicted RBP7.43□□□□□ -1.22
RNF4-220ENST00000513578 FAM27D1Q5T7N8 215 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 HIST2H3PS2Q5TEC6 136 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 AGAP7PQ5VUJ5 663 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 STEAP3Q658P3 488 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 LRFN4Q6PJG9 635 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 IGFL2Q6UWQ7 119 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 LRRN1Q6UXK5 716 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 ZNF704Q6ZNC4 412 aaPredicted RBP7.43□□□□□ -1.22
RNF4-220ENST00000513578 LRRC69Q6ZNQ3 347 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 HIST2H3AQ71DI3 136 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 DCXRQ7Z4W1 244 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 GPAT4Q86UL3 456 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 LRRC28Q86X40 367 aaPredicted RBP7.43□□□□□ -1.22
RNF4-220ENST00000513578 C20orf196Q8IYI0 205 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 ZIC4Q8N9L1 334 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 ZFP62Q8NB50 900 aaPredicted RBP7.43□□□□□ -1.22
RNF4-220ENST00000513578 IL17RDQ8NFM7 739 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 OR13C5Q8NGS8 318 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 HSD17B8Q92506 261 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 CPNE4Q96A23 557 aaPredicted RBP7.43□□□□□ -1.22
RNF4-220ENST00000513578 TMEM45BQ96B21 275 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 PPP1R14BQ96C90 147 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 DIRAS2Q96HU8 199 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 AGAP4Q96P64 663 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 OR2M2Q96R28 347 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 OR14A2Q96R54 314 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 KCNJ15Q99712 375 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 WACQ9BTA9 647 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 SRXN1Q9BYN0 137 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 SLITRK2Q9H156 845 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 C1orf198Q9H425 327 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 PPP1R3EQ9H7J1 279 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 MOB1AQ9H8S9 216 aa7.43□□□□□ -1.22
RNF4-220ENST00000513578 RNF122Q9H9V4 155 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms