RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 OR2V2Q96R30 315 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 ZNF607Q96SK3 696 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 WFDC6Q9BQY6 131 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 C16orf95Q9H693 158 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 ELOVL3Q9HB03 270 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 GCM1Q9NP62 436 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 MAN2C1Q9NTJ4 1040 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 LGALS13Q9UHV8 139 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 UGT2A1Q9Y4X1 527 aa9.11□□□□□ -0.95
DDX41-216ENST00000513562 SDHDO14521 159 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 TYROBPO43914 113 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 PIP5K1CO60331 668 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 ZNF205O95201 554 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 FSTL3O95633 263 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 CH25HO95992 272 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 ASAH2BP0C7U1 165 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 GSTM3P21266 225 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 KITLGP21583 273 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 CDAP32320 146 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 PITPNBP48739 271 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 LOXL3P58215 753 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 ERVK-25P63136 954 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 TAF11Q15544 211 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 TTMPQ5BVD1 217 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 ZNF613Q6PF04 617 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 MSANTD1Q6ZTZ1 278 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 NLRC3Q7RTR2 1065 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 RANBP3LQ86VV4 465 aaPredicted RBP9.1□□□□□ -0.95
DDX41-216ENST00000513562 KRT73Q86Y46 540 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 LDLRAD3Q86YD5 345 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 OR8B3Q8NGG8 313 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 ASB10Q8WXI3 467 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 GATAD2BQ8WXI9 593 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 NMD3Q96D46 503 aaKnown RBP9.1□□□□□ -0.95
DDX41-216ENST00000513562 ITCHQ96J02 903 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 C4orf45Q96LM5 186 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 OR8B2Q96RD0 313 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 TMEM246Q9BRR3 403 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 SPATA5L1Q9BVQ7 753 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 CDADC1Q9BWV3 514 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 OR2H1Q9GZK4 316 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 WNT5BQ9H1J7 359 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 RMND5AQ9H871 391 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 SMURF2Q9HAU4 748 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 NANSQ9NR45 359 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 ACOXLQ9NUZ1 547 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 ZNF229Q9UJW7 825 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 DNAH3Q8TD57 4116 aa9.1□□□□□ -0.95
DDX41-216ENST00000513562 CENPVL3A0A0U1RRI6 287 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 WDR91A4D1P6 747 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 PRORSD1PA6NEY8 169 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 C22orf46C9J442 243 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 P2RY10O00398 339 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 PHYHO14832 338 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 CHP2O43745 196 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 ENSAO43768 121 aaKnown RBP9.09□□□□□ -0.95
DDX41-216ENST00000513562 FMO6PO60774 539 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 TRMUO75648 421 aaKnown RBP9.09□□□□□ -0.95
DDX41-216ENST00000513562 SLC22A3O75751 556 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 SLC2A10O95528 541 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 CYB5R3P00387 301 aaPredicted RBP9.09□□□□□ -0.95
DDX41-216ENST00000513562 SFTPBP07988 381 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 MMP9P14780 707 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 CFHR2P36980 270 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 IER3P46695 156 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 SLC1A6P48664 564 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 BST1Q10588 318 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 ZNF404Q494X3 552 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 C6orf10Q5SRN2 563 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 HHATQ5VTY9 493 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 WDR25Q64LD2 544 aaPredicted RBP9.09□□□□□ -0.95
DDX41-216ENST00000513562 GDPGP1Q6ZNW5 385 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 HDDC2Q7Z4H3 204 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 ALDH16A1Q8IZ83 802 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 EIF1ADQ8N9N8 165 aaKnown RBP9.09□□□□□ -0.95
DDX41-216ENST00000513562 NPEPL1Q8NDH3 523 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 NFKBIDQ8NI38 313 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 MAGEB18Q96M61 343 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 PCGF1Q9BSM1 259 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 POFUT1Q9H488 388 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 RAD21L1Q9H4I0 556 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 KIF17Q9P2E2 1029 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 CLN8Q9UBY8 286 aa9.09□□□□□ -0.95
DDX41-216ENST00000513562 IGKV1D-43A0A0B4J1Z2 117 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 A0A1W2PRG6 482 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 ZNF879B4DU55 563 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 MCIDASD6RGH6 385 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 CLIC1O00299 241 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 TSPAN9O75954 239 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 LYPD3O95274 346 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 ABHD16AO95870 558 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 VSIG8P0DPA2 414 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 ACADSP16219 412 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 HOXB9P17482 250 aaPredicted RBP9.08□□□□□ -0.96
DDX41-216ENST00000513562 TUBG1P23258 451 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 DAP3P51398 398 aaKnown RBP9.08□□□□□ -0.96
DDX41-216ENST00000513562 UGT2B15P54855 530 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 PCBP3P57721 371 aaKnown RBP9.08□□□□□ -0.96
DDX41-216ENST00000513562 CDK6Q00534 326 aa9.08□□□□□ -0.96
DDX41-216ENST00000513562 GCNT6Q5T4J0 391 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms