RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 A0A096LPE4 126 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 A0A1W2PPZ6 126 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 PTGES3LE9PB15 166 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 ZG16O60844 167 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 TMCC2O75069 709 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 RAD51DO75771 328 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 FADS2O95864 444 aaKnown RBP10.97□□□□□ -0.65
PDPN-210ENST00000513143 OR2T7P0C7T2 308 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 PSKH1P11801 424 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 FAM27E3Q08E93 113 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 ST3GAL4Q11206 333 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 CDSNQ15517 529 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 TSC22D1Q15714 1073 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 TBRG1Q3YBR2 411 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 AHSA2Q719I0 299 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 SHFQ7M4L6 423 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 BHLHA15Q7RTS1 189 aaPredicted RBP10.97□□□□□ -0.65
PDPN-210ENST00000513143 DPY19L4Q7Z388 723 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.97□□□□□ -0.65
PDPN-210ENST00000513143 SYT9Q86SS6 491 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 SKA3Q8IX90 412 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 SLC35F2Q8IXU6 374 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 CCDC36Q8IYA8 594 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 LRRC18Q8N456 261 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 C17orf78Q8N4C9 275 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 OR2T27Q8NH04 317 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 CA5BP1Q8WTZ4 195 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 SMAP2Q8WU79 429 aaPredicted RBP10.97□□□□□ -0.65
PDPN-210ENST00000513143 ITLN2Q8WWU7 325 aaPredicted RBP10.97□□□□□ -0.65
PDPN-210ENST00000513143 FBXO17Q96EF6 278 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 MNTQ99583 582 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 SH3GL3Q99963 347 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 COPS4Q9BT78 406 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 CDADC1Q9BWV3 514 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 JAM3Q9BX67 310 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 PAK1IP1Q9NWT1 392 aaPredicted RBP10.97□□□□□ -0.65
PDPN-210ENST00000513143 GALNT8Q9NY28 637 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 ZNF224Q9NZL3 707 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 LHFPL6Q9Y693 200 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 HCFC1P51610 2035 aa10.97□□□□□ -0.65
PDPN-210ENST00000513143 TRIM64A6NGJ6 449 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 FAM90A27PA6NNH2 459 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 C12orf71A8MTZ7 269 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 RAB36O95755 333 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 IGHA1P01876 353 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 CDK1P06493 297 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 ADRA2AP08913 450 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 SPARCP09486 303 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 ALOX5APP20292 161 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 DCKP27707 260 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 RPS27P42677 84 aaKnown RBP10.96□□□□□ -0.65
PDPN-210ENST00000513143 HCCSP53701 268 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 GABARAPL2P60520 117 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 ACTC1P68032 377 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 ACTA1P68133 377 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 MVKQ03426 396 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 AQP6Q13520 282 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 KCTD21Q4G0X4 260 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 HIKESHIQ53FT3 197 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 SLC18B1Q6NT16 456 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 CORO6Q6QEF8 472 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 SLC16A14Q7RTX9 510 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 DPPA2Q7Z7J5 298 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 LINC00346Q8IVM7 164 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 ZNF808Q8N4W9 903 aaPredicted RBP10.96□□□□□ -0.65
PDPN-210ENST00000513143 OTOSQ8NHW6 89 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 SGCDQ92629 289 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 MYDGFQ969H8 173 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 TMEM80Q96HE8 168 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 SIGLEC11Q96RL6 698 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 USB1Q9BQ65 265 aaKnown RBP10.96□□□□□ -0.65
PDPN-210ENST00000513143 OR10A4Q9H209 315 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 KCNN2Q9H2S1 579 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 CCNB1IP1Q9NPC3 277 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 KCNJ16Q9NPI9 418 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 SLC17A5Q9NRA2 495 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 ASH2LQ9UBL3 628 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 DIMT1Q9UNQ2 313 aaKnown RBP10.96□□□□□ -0.65
PDPN-210ENST00000513143 POLR1DQ9Y2S0 133 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 TMEM14AQ9Y6G1 99 aa10.96□□□□□ -0.65
PDPN-210ENST00000513143 SPTBN1Q01082 2364 aaKnown RBP10.95□□□□□ -0.66
PDPN-210ENST00000513143 ARPC4-TTLL3A0A0A6YYG9 625 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 A0A1W2PQL4 384 aaPredicted RBP10.95□□□□□ -0.66
PDPN-210ENST00000513143 NKX2-6A6NCS4 301 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 OR5H1A6NKK0 313 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 C16orf97H3BN30 126 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 PYCARD-AS1I3L0S3 204 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 UBL3O95164 117 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 TNFAIP8O95379 198 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 CLDN14O95500 239 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 MMP7P09237 267 aaPredicted RBP10.95□□□□□ -0.66
PDPN-210ENST00000513143 IL32P24001 234 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 C21orf33P30042 268 aaPredicted RBP10.95□□□□□ -0.66
PDPN-210ENST00000513143 UGT2B10P36537 528 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 PCBD1P61457 104 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 HIST1H3AP68431 136 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 SLC36A2Q495M3 483 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 C1QTNF12Q5T7M4 302 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 HIST2H3PS2Q5TEC6 136 aa10.95□□□□□ -0.66
PDPN-210ENST00000513143 HIST2H3AQ71DI3 136 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms