RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 ANKRD42Q8N9B4 389 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 NOXO1Q8NFA2 376 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 OR2Z1Q8NG97 314 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 GEMIN6Q8WXD5 167 aaKnown RBP6.09□□□□□ -1.43
HMGCR-211ENST00000512053 GTF2H4Q92759 462 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 MPP4Q96JB8 637 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 POM121L2Q96KW2 1035 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 C4orf45Q96LM5 186 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 ZNF48Q96MX3 618 aaPredicted RBP6.09□□□□□ -1.43
HMGCR-211ENST00000512053 ZNF347Q96SE7 839 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 ARHGDIGQ99819 225 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 TMEM109Q9BVC6 243 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 SSBP3Q9BWW4 388 aaPredicted RBP6.09□□□□□ -1.43
HMGCR-211ENST00000512053 PAIP1Q9H074 479 aaKnown RBP6.09□□□□□ -1.43
HMGCR-211ENST00000512053 MSL2Q9HCI7 577 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 NPHS2Q9NP85 383 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 BRD7Q9NPI1 651 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 TUBG2Q9NRH3 451 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 TNFRSF19Q9NS68 423 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 MAN2C1Q9NTJ4 1040 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.09□□□□□ -1.43
HMGCR-211ENST00000512053 SLC7A7Q9UM01 511 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 PPP1R3CQ9UQK1 317 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 LRCH1Q9Y2L9 728 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 TIMM10BQ9Y5J6 103 aa6.09□□□□□ -1.43
HMGCR-211ENST00000512053 ARFGEF3Q5TH69 2177 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.08□□□□□ -1.442e-9■□□□□ 10.5
HMGCR-211ENST00000512053 TRAPPC13A5PLN9 417 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 A8MXK9 166 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 IFNL4K9M1U5 179 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 HOXA3O43365 443 aaPredicted RBP6.08□□□□□ -1.44
HMGCR-211ENST00000512053 TRMUO75648 421 aaKnown RBP6.08□□□□□ -1.44
HMGCR-211ENST00000512053 F13BP05160 661 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 MMP7P09237 267 aaPredicted RBP6.08□□□□□ -1.44
HMGCR-211ENST00000512053 ZNF32P17041 273 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 CDAP32320 146 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 RAG2P55895 527 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 BPIFB3P59826 476 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 ERVK-25P63136 954 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 PSG4Q00888 419 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 PAX8Q06710 450 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 CD47Q08722 323 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 PDCD1Q15116 288 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 NPTX1Q15818 432 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 HIST3H3Q16695 136 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 KLF17Q5JT82 389 aaPredicted RBP6.08□□□□□ -1.44
HMGCR-211ENST00000512053 ENTPD8Q5MY95 495 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 FAM205BPQ63HN1 556 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 OLFML2AQ68BL7 652 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 SLC27A4Q6P1M0 643 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 C9orf139Q6ZV77 190 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 NLRC3Q7RTR2 1065 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 CROCCP2Q86T23 111 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 COMTD1Q86VU5 262 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 JAZF1Q86VZ6 243 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 ZNF101Q8IZC7 436 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 SMYD1Q8NB12 490 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 NPEPL1Q8NDH3 523 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 OR9I1Q8NGQ6 314 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 AKR7LQ8NHP1 331 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 VANGL1Q8TAA9 524 aaPredicted RBP6.08□□□□□ -1.44
HMGCR-211ENST00000512053 FNDC8Q8TC99 324 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 ADAMTS16Q8TE57 1224 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 RAB40AQ8WXH6 277 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 NSMAFQ92636 917 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 MAELQ96JY0 434 aaKnown RBP6.08□□□□□ -1.44
HMGCR-211ENST00000512053 C1orf147Q96MC9 270 aaPredicted RBP6.08□□□□□ -1.44
HMGCR-211ENST00000512053 COG8Q96MW5 612 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 RBP7Q96R05 134 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 PKP2Q99959 881 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 TMEM38AQ9H6F2 299 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 SMURF2Q9HAU4 748 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 NOX4Q9NPH5 578 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 INIPQ9NRY2 104 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 MIOXQ9UGB7 285 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 IL19Q9UHD0 177 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 KLHL21Q9UJP4 597 aa6.08□□□□□ -1.44
HMGCR-211ENST00000512053 NDRG4Q9ULP0 352 aaKnown RBP6.08□□□□□ -1.44
HMGCR-211ENST00000512053 HEATR1Q9H583 2144 aaKnown RBP6.07□□□□□ -1.44
HMGCR-211ENST00000512053 LOC100509620A0A075B734 347 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 TRAV40A0A0B4J280 105 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 CLPSL1A2RUU4 121 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 LRRC30A6NM36 301 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 SRRM5B3KS81 715 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 M0QX08 132 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 M0R3H8 397 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 TPST2O60704 377 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 ERLIN1O75477 346 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 SLC2A10O95528 541 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 ABHD16AO95870 558 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 NGFP01138 241 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 WNT2P09544 360 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 ASAH2BP0C7U1 165 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 RPS2P15880 293 aaKnown RBP6.07□□□□□ -1.44
HMGCR-211ENST00000512053 GPX2P18283 190 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 FUT1P19526 365 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 FSTP19883 344 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 CD80P33681 288 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 WNT5AP41221 380 aa6.07□□□□□ -1.44
HMGCR-211ENST00000512053 UGT2B15P54855 530 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms