RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 DHFR2Q86XF0 187 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 OR1J2Q8NGS2 313 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 OR1J1Q8NGS3 322 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 GTF3AQ92664 365 aaKnown RBP14.14□□□□□ -0.15
DDX41-213ENST00000512027 ERMAPQ96PL5 475 aaPredicted RBP14.14□□□□□ -0.15
DDX41-213ENST00000512027 BTBD10Q9BSF8 475 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 BPESC1Q9GZL8 116 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 NUAK2Q9H093 628 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 YAE1D1Q9NRH1 226 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 VSX1Q9NZR4 365 aaPredicted RBP14.14□□□□□ -0.15
DDX41-213ENST00000512027 REV1Q9UBZ9 1251 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 TMCC3Q9ULS5 477 aa14.14□□□□□ -0.15
DDX41-213ENST00000512027 IGHV4-61A0A0C4DH41 118 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 CD5LO43866 347 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 NCR1O76036 304 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 UBOX5O94941 541 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 TXNDC12O95881 172 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 HPXP02790 462 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 ZNF16P17020 682 aaPredicted RBP14.13□□□□□ -0.15
DDX41-213ENST00000512027 GUCA1AP43080 201 aaPredicted RBP14.13□□□□□ -0.15
DDX41-213ENST00000512027 NR4A2P43354 598 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 MAGEA2P43356 314 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 GSSP48637 474 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 EVX1P49640 407 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 GDI2P50395 445 aaKnown RBP14.13□□□□□ -0.15
DDX41-213ENST00000512027 RPS6KA3P51812 740 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 TRIM25Q14258 630 aaKnown RBP14.13□□□□□ -0.15
DDX41-213ENST00000512027 RFX4Q33E94 735 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 TMEM255AQ5JRV8 349 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 GPR139Q6DWJ6 353 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 RFPL4BQ6ZWI9 263 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.13□□□□□ -0.15
DDX41-213ENST00000512027 BCAS4Q8TDM0 211 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 IFT27Q9BW83 186 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 FN3KQ9H479 309 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 EGLN3Q9H6Z9 239 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 TAAR3PQ9P1P4 343 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 TIMM10BQ9Y5J6 103 aa14.13□□□□□ -0.15
DDX41-213ENST00000512027 LOC390937A0A1W2PQ73 354 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 TNFRSF11BO00300 401 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 KHDRBS3O75525 346 aaKnown RBP14.12□□□□□ -0.15
DDX41-213ENST00000512027 STAMBPO95630 424 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 USF1P22415 310 aaPredicted RBP14.12□□□□□ -0.15
DDX41-213ENST00000512027 SLC6A6P31641 620 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 MPV17P39210 176 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 KLF3P57682 345 aaPredicted RBP14.12□□□□□ -0.15
DDX41-213ENST00000512027 MEP1BQ16820 701 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 NKPD1Q17RQ9 610 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 MTX3Q5HYI7 312 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 C1orf94Q6P1W5 598 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 LEG1Q6P5S2 330 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 ZNF620Q6ZNG0 422 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 TRPM8Q7Z2W7 1104 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 ARHGAP24Q8N264 748 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 OR4C15Q8NGM1 316 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 OR4K13Q8NH42 304 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 SYNPRQ8TBG9 265 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 GNPDA2Q8TDQ7 276 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 NEU4Q8WWR8 484 aaPredicted RBP14.12□□□□□ -0.15
DDX41-213ENST00000512027 SLC7A6Q92536 515 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 NMNAT3Q96T66 252 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 THTPAQ9BU02 230 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 LRMDAQ9H2I8 198 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 PRPF19Q9UMS4 504 aaKnown RBP14.12□□□□□ -0.15
DDX41-213ENST00000512027 MALRD1Q5VYJ5 2156 aa14.12□□□□□ -0.15
DDX41-213ENST00000512027 IGLV3-9A0A075B6K5 115 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 C12orf71A8MTZ7 269 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 NDUFS8O00217 210 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 DOK2O60496 412 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 NGFP01138 241 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 ERCC1P07992 297 aaPredicted RBP14.11□□□□□ -0.15
DDX41-213ENST00000512027 IGHV4-31P0DP07 118 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 ZNF250P15622 560 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 HIST1H1CP16403 213 aaKnown RBP14.11□□□□□ -0.15
DDX41-213ENST00000512027 RAD52P43351 418 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 MAGEB1P43366 347 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 CENPAP49450 140 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 PCBD1P61457 104 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 TSPAN31Q12999 210 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 CLEC12AQ5QGZ9 265 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 ELFN2Q5R3F8 820 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 SLC35F1Q5T1Q4 408 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 C6orf52Q5T4I8 152 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 ADCK1Q86TW2 530 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 ALDH16A1Q8IZ83 802 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 SDR9C7Q8NEX9 313 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 ABHD4Q8TB40 342 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 SLC25A40Q8TBP6 338 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 UBASH3BQ8TF42 649 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 IPCEF1Q8WWN9 437 aaPredicted RBP14.11□□□□□ -0.15
DDX41-213ENST00000512027 C11orf40Q8WZ69 217 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 SOX7Q9BT81 388 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 PLA2G12AQ9BZM1 189 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 BCL2L14Q9BZR8 327 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 MUC13Q9H3R2 512 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 MYOZ1Q9NP98 299 aaPredicted RBP14.11□□□□□ -0.15
DDX41-213ENST00000512027 FBXO9Q9UK97 447 aaPredicted RBP14.11□□□□□ -0.15
DDX41-213ENST00000512027 U3KQV3 271 aa14.11□□□□□ -0.15
DDX41-213ENST00000512027 CUBNO60494 3623 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 IGLV1-36A0A0B4J1U3 117 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms