RNA–Protein interactions for RNA: ENST00000511496.5

LIMCH1-213, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-213ENST00000511496 NXPH2O95156 264 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 IL9P15248 144 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 GRPRP30550 384 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 CEACAM8P31997 349 aaPredicted RBP10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 FHITP49789 147 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 PNLIPRP3Q17RR3 467 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 AGTRAPQ6RW13 159 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 STAC2Q6ZMT1 411 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 LYG2Q86SG7 212 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 VRK2Q86Y07 508 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 OR4S1Q8NGB4 309 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 SFXN5Q8TD22 340 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 CNTNAP3Q9BZ76 1288 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 INPP5EQ9NRR6 644 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 PLA2G2EQ9NZK7 142 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 TMED7Q9Y3B3 224 aa10.93□□□□□ -0.66
LIMCH1-213ENST00000511496 TMEM210A6NLX4 147 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 A8MXE2 369 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 DVL1O14640 695 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 PTGESO14684 152 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 DFFBO76075 338 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 CALCBP10092 127 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 SULT1A2P50226 295 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 GATMP50440 423 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 CCR4P51679 360 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 S100A10P60903 97 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 FAM98CQ17RN3 349 aaKnown RBP10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 ZNF563Q8TA94 476 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 FIBINQ8TAL6 211 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 MRI1Q9BV20 369 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 GPR87Q9BY21 358 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 OR2AG1Q9H205 316 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 PARP11Q9NR21 331 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 PRR13Q9NZ81 148 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 VSIG4Q9Y279 399 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 OGG1O15527 345 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 PRH1P02810 166 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 KCNE1P15382 129 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 DPEP1P16444 411 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 CD82P27701 267 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 TAS2R19P59542 299 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 UBE2KP61086 200 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 RPS24P62847 133 aaKnown RBP10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 PAX5Q02548 391 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 C10orf120Q5SQS8 335 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 TEX38Q6PEX7 206 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 OR51A7Q8NH64 312 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 SMARCD2Q92925 531 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 SLC35B3Q9H1N7 401 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 POMT1Q9Y6A1 747 aa10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 HELZP42694 1942 aaKnown RBP10.92□□□□□ -0.66
LIMCH1-213ENST00000511496 DHRS7CA6NNS2 312 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 RPLP2P05387 115 aaKnown RBP10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 ERCC1P07992 297 aaPredicted RBP10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 IRF2P14316 349 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 ADRA2CP18825 462 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 THBS4P35443 961 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 SNCAP37840 140 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 ERVFC1-1P60608 527 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 TLE4Q04727 773 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 PDE7AQ13946 482 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 SLC22A25Q6T423 547 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 OR10A7Q8NGE5 316 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 OR13C8Q8NGS7 320 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 ADGRG7Q96K78 797 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 LMF1Q96S06 567 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 SLC6A7Q99884 636 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 LPAR2Q9HBW0 351 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 SERINC1Q9NRX5 453 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 GRHPRQ9UBQ7 328 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 STARD10Q9Y365 291 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 ZNF736B4DX44 427 aaPredicted RBP10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 MASP2O00187 686 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 WNT11O96014 354 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 CYB5AP00167 134 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 AMBPP02760 352 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 SRSF4Q08170 494 aaKnown RBP10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 TPGS2Q68CL5 300 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 SSX7Q7RTT5 188 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 FAM185AQ8N0U4 392 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 TMEM86AQ8N2M4 240 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 SUMF2Q8NBJ7 301 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 OR51F2Q8NH61 342 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 YPEL4Q96NS1 127 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 CAPN10Q9HC96 672 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 ZCCHC3Q9NUD5 404 aaKnown RBP10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 MRPL22Q9NWU5 206 aaKnown RBP10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 RPH3ALQ9UNE2 315 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 TRPM7Q96QT4 1865 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 KDM4FA0A1W2PPD8 638 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 A0A1W2PPQ1 181 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 CTAG2O75638 210 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 GALTP07902 379 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 TBPP20226 339 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 ZBTB25P24278 435 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 CHATP28329 748 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 PBX2P40425 430 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 LBX1P52954 281 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 FXYD6P3P58550 94 aa10.91□□□□□ -0.66
LIMCH1-213ENST00000511496 RTL6Q6ICC9 239 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms