RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 RAG2P55895 527 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 AP1S1P61966 158 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 SNRPFP62306 86 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 SNX1Q13596 522 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 CYTH1Q15438 398 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 EIPR1Q53HC9 387 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 TCHHL1Q5QJ38 904 aaPredicted RBP2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 LINC00242Q5T6M2 205 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 HENMT1Q5T8I9 393 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 GPR157Q5UAW9 335 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 TAF3Q5VWG9 929 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 SAXO2Q658L1 398 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 ADNP2Q6IQ32 1131 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 RWDD4Q6NW29 188 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 SCIMPQ6UWF3 145 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 FAM159AQ6UWV7 190 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 WDR88Q6ZMY6 472 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 RFLNAQ6ZTI6 216 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 AMZ2Q86W34 360 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 TRAPPC5Q8IUR0 188 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 DEFB106AQ8N104 65 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 RNF148Q8N7C7 305 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 SIGLECL1Q8N7X8 197 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 OR56B1Q8NGI3 324 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 NEIL3Q8TAT5 605 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 RAB3IL1Q8TBN0 382 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 THRSPQ92748 146 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 PINX1Q96BK5 328 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 C12orf66Q96MD2 445 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 MCCC1Q96RQ3 725 aaPredicted RBP2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 CPXM1Q96SM3 734 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 FAM173AQ9BQD7 235 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 BPESC1Q9GZL8 116 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 RAB17Q9H0T7 212 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 SIRPDQ9H106 197 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 UGT1A8Q9HAW9 530 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 MYOZ1Q9NP98 299 aaPredicted RBP2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 NRN1Q9NPD7 142 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 NGBQ9NPG2 151 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 CLEC5AQ9NY25 188 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 TAS2R16Q9NYV7 291 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 AIPL1Q9NZN9 384 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 MIOXQ9UGB7 285 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 MLXQ9UH92 298 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 KIAA1257Q9ULG3 409 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 ZNF175Q9Y473 711 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 HEBP2Q9Y5Z4 205 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 U3KQV3 271 aa2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 DMBT1Q9UGM3 2413 aaPredicted RBP2.68□□□□□ -1.98
TOPBP1-208ENST00000511439 NPIPA5A0A0B4J1W7 369 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 A0A0G2JMM0 328 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 A0A1W2PPB8 328 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 A0A1W2PRS3 328 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 CLPSL1A2RUU4 121 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 KIR3DP1A8MWS1 328 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 RIPK2O43353 540 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 CDK14O94921 469 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 RCBTB2O95199 551 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 DIRAS3O95661 229 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 KRT6BP04259 564 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 CRYBA1P05813 215 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 ANXA5P08758 320 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 HSD17B1P14061 328 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 UGT2B7P16662 529 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 UCP1P25874 307 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 SAA4P35542 130 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 RGRP47804 291 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 KRT6CP48668 564 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 RPL34P49207 117 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 STC1P52823 247 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 YWHAEP62258 255 aaKnown RBP2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 PLOD1Q02809 727 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 BAMBIQ13145 260 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 CD226Q15762 336 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 ZSWIM7Q19AV6 140 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 CCDC14Q49A88 953 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 LRRC23Q53EV4 343 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 SLC25A30Q5SVS4 291 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 SLC25A24Q6NUK1 477 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 ZCCHC12Q6PEW1 402 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 DPY19L2P2Q6ZN68 376 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 LANCL3Q6ZV70 420 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 LUZP1Q86V48 1076 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 ZNF547Q8IVP9 402 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 CDKL3Q8IVW4 592 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 GCNT2Q8N0V5 402 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 MLKLQ8NB16 471 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 OR6T1Q8NGN1 323 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 NANPQ8TBE9 248 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 SLC5A11Q8WWX8 675 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 CTNNBL1Q8WYA6 563 aaPredicted RBP2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 PHYHIPQ92561 330 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 LRRC58Q96CX6 371 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 GPA33Q99795 319 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 SELENOSQ9BQE4 189 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 C11orf70Q9BRQ4 267 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 NDUFAF3Q9BU61 184 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 TPPP3Q9BW30 176 aa2.67□□□□□ -1.98
TOPBP1-208ENST00000511439 COQ10BQ9H8M1 238 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms