RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 ABHD4Q8TB40 342 aa19.28■□□□□ 0.68
SMAD5-207ENST00000511116 GEMIN6Q8WXD5 167 aaKnown RBP19.28■□□□□ 0.68
SMAD5-207ENST00000511116 C1orf147Q96MC9 270 aaPredicted RBP19.28■□□□□ 0.68
SMAD5-207ENST00000511116 NPHS2Q9NP85 383 aa19.28■□□□□ 0.68
SMAD5-207ENST00000511116 MMP26Q9NRE1 261 aa19.28■□□□□ 0.68
SMAD5-207ENST00000511116 DCAF16Q9NXF7 216 aa19.28■□□□□ 0.68
SMAD5-207ENST00000511116 RIMS3Q9UJD0 308 aa19.28■□□□□ 0.68
SMAD5-207ENST00000511116 ISPDA4D126 451 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 A8MXK9 166 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 ZNF12P17014 697 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 CD47Q08722 323 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 NFYCQ13952 458 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 LAPTM4AQ15012 233 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 SGCAQ16586 387 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 TMEM155Q4W5P6 130 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 KLF17Q5JT82 389 aaPredicted RBP19.27■□□□□ 0.68
SMAD5-207ENST00000511116 CALHM3Q86XJ0 350 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 ALDH16A1Q8IZ83 802 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 ZNF283Q8N7M2 679 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 FNDC8Q8TC99 324 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 NSMAFQ92636 917 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 ELOVL3Q9HB03 270 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 PLEK2Q9NYT0 353 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 UBAP1Q9NZ09 502 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 NUP50Q9UKX7 468 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 BAG5Q9UL15 447 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 SH3GLB1Q9Y371 365 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 TIMM10BQ9Y5J6 103 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 TGP01266 2768 aa19.27■□□□□ 0.68
SMAD5-207ENST00000511116 F5H0A9 414 aaPredicted RBP19.26■□□□□ 0.67
SMAD5-207ENST00000511116 TRAPPC2LH3BP13 241 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 LAP3P28838 519 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 TAS2R41P59536 307 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 PSG7Q13046 419 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 ZNF154Q13106 437 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 PIN1Q13526 163 aaPredicted RBP19.26■□□□□ 0.67
SMAD5-207ENST00000511116 MTX3Q5HYI7 312 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 C4orf45Q96LM5 186 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 PATZ1Q9HBE1 687 aaKnown RBP19.26■□□□□ 0.67
SMAD5-207ENST00000511116 MSL2Q9HCI7 577 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 TMEM106BQ9NUM4 274 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 ZNF69Q9UC07 566 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 MED31Q9Y3C7 131 aa19.26■□□□□ 0.67
SMAD5-207ENST00000511116 HTR3EA5X5Y0 456 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 TNFRSF1BP20333 461 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 SLC6A9P48067 706 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 RPL27P61353 136 aaKnown RBP19.25■□□□□ 0.67
SMAD5-207ENST00000511116 PCBD1P61457 104 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 TNFAIP6P98066 277 aaPredicted RBP19.25■□□□□ 0.67
SMAD5-207ENST00000511116 ENDOGQ14249 297 aaKnown RBP19.25■□□□□ 0.67
SMAD5-207ENST00000511116 ALG10Q5BKT4 473 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 NANOGP8Q6NSW7 305 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 ZER1Q7Z7L7 766 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 SYT9Q86SS6 491 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 LRRC28Q86X40 367 aaPredicted RBP19.25■□□□□ 0.67
SMAD5-207ENST00000511116 SPICQ8N5J4 248 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 LRRC75AQ8NAA5 344 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 SAMD8Q96LT4 415 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 SIGLEC11Q96RL6 698 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 GPA33Q99795 319 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 INSIG2Q9Y5U4 225 aa19.25■□□□□ 0.67
SMAD5-207ENST00000511116 DNAJC9-AS1A6NH13 148 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 COX5BP10606 129 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 TUBG1P23258 451 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 HNRNPA0Q13151 305 aaKnown RBP19.24■□□□□ 0.67
SMAD5-207ENST00000511116 FAM205BPQ63HN1 556 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 ZNF774Q6NX45 483 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 RBMS3Q6XE24 437 aaKnown RBP19.24■□□□□ 0.67
SMAD5-207ENST00000511116 ZNF771Q7L3S4 317 aaPredicted RBP19.24■□□□□ 0.67
SMAD5-207ENST00000511116 CLDN22Q8N7P3 220 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 ZNF48Q96MX3 618 aaPredicted RBP19.24■□□□□ 0.67
SMAD5-207ENST00000511116 RBP7Q96R05 134 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 WACQ9BTA9 647 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 TUBG2Q9NRH3 451 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 TBCCD1Q9NVR7 557 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 AUP1Q9Y679 476 aa19.24■□□□□ 0.67
SMAD5-207ENST00000511116 CLDN34H7C241 214 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 FXYD1O00168 92 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 FBP2O00757 339 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 SBK2P0C263 348 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 KITLGP21583 273 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 ARHGDIAP52565 204 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 FHL1Q13642 323 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 ARMCX4Q5H9R4 360 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 Q6ZR03 302 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 KLHL36Q8N4N3 616 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 NPEPL1Q8NDH3 523 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 EGFL7Q9UHF1 273 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 NDRG4Q9ULP0 352 aaKnown RBP19.23■□□□□ 0.67
SMAD5-207ENST00000511116 CMYA5Q8N3K9 4069 aa19.23■□□□□ 0.67
SMAD5-207ENST00000511116 RNASE1P07998 156 aaKnown RBP19.22■□□□□ 0.67
SMAD5-207ENST00000511116 MSR1P21757 451 aa19.22■□□□□ 0.67
SMAD5-207ENST00000511116 SEC61A1P61619 476 aaKnown RBP19.22■□□□□ 0.67
SMAD5-207ENST00000511116 BTG1P62324 171 aa19.22■□□□□ 0.67
SMAD5-207ENST00000511116 RABL3Q5HYI8 236 aa19.22■□□□□ 0.67
SMAD5-207ENST00000511116 ARL9Q6T311 187 aa19.22■□□□□ 0.67
SMAD5-207ENST00000511116 BCL6BQ8N143 479 aaPredicted RBP19.22■□□□□ 0.67
SMAD5-207ENST00000511116 OR8J3Q8NGG0 315 aa19.22■□□□□ 0.67
SMAD5-207ENST00000511116 C1QTNF5Q9BXJ0 243 aa19.22■□□□□ 0.67
SMAD5-207ENST00000511116 MAN2C1Q9NTJ4 1040 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms