RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 PYURFQ96I23 114 aa15.31■□□□□ 0.04
TPM3-220ENST00000509601 NRIP3Q9NQ35 241 aa15.31■□□□□ 0.04
TPM3-220ENST00000509601 POLE4Q9NR33 117 aa15.31■□□□□ 0.04
TPM3-220ENST00000509601 ZNF275Q9NSD4 429 aaPredicted RBP15.31■□□□□ 0.04
TPM3-220ENST00000509601 ARL8BQ9NVJ2 186 aa15.31■□□□□ 0.04
TPM3-220ENST00000509601 SAMD4AQ9UPU9 718 aaKnown RBP15.31■□□□□ 0.04
TPM3-220ENST00000509601 TMEM5Q9Y2B1 443 aa15.31■□□□□ 0.04
TPM3-220ENST00000509601 A0A1W2PPL8 197 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 PRSS37A4D1T9 235 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 IMPA2O14732 288 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 AHCYL1O43865 530 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 ICMTO60725 284 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 NGFP01138 241 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 HSD17B1P14061 328 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 MSR1P21757 451 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 MPV17P39210 176 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 GUCA1AP43080 201 aaPredicted RBP15.3■□□□□ 0.04
TPM3-220ENST00000509601 GPR6P46095 362 aaPredicted RBP15.3■□□□□ 0.04
TPM3-220ENST00000509601 IL17RELQ6ZVW7 336 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 ALDH16A1Q8IZ83 802 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 LINC01356Q8N9X3 169 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 ICA1LQ8NDH6 482 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 OR52J3Q8NH60 311 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 SLC25A40Q8TBP6 338 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 CDRT15Q96T59 188 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 EMC7Q9NPA0 242 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 NKIRAS2Q9NYR9 191 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 EIF3KQ9UBQ5 218 aaKnown RBP15.3■□□□□ 0.04
TPM3-220ENST00000509601 GPR160Q9UJ42 338 aa15.3■□□□□ 0.04
TPM3-220ENST00000509601 NDUFB2O95178 105 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 CTLA4P16410 223 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 MMP15P51511 669 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 CDH15P55291 814 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 PCBD1P61457 104 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 GNGT1P63211 74 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 CCL8P80075 99 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 MOGQ16653 247 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 CR1LQ2VPA4 569 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 ZNF718Q3SXZ3 478 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 FGD3Q5JSP0 725 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 SPATA46Q5T0L3 261 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 TMEM154Q6P9G4 183 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 ZER1Q7Z7L7 766 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 CLDND2Q8NHS1 167 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 KLF14Q8TD94 323 aaPredicted RBP15.29■□□□□ 0.04
TPM3-220ENST00000509601 RASD2Q96D21 266 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 ZNF570Q96NI8 536 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 GPX7Q96SL4 187 aaPredicted RBP15.29■□□□□ 0.04
TPM3-220ENST00000509601 WACQ9BTA9 647 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 OR2J1Q9GZK6 312 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 NSRP1Q9H0G5 558 aaKnown RBP15.29■□□□□ 0.04
TPM3-220ENST00000509601 IL20RAQ9UHF4 553 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 KLHL21Q9UJP4 597 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 IER3IP1Q9Y5U9 82 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 STAB1Q9NY15 2570 aa15.29■□□□□ 0.04
TPM3-220ENST00000509601 TEX13CA0A0J9YWL9 993 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 UNC119BA6NIH7 251 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 C12orf71A8MTZ7 269 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 XKRYO14609 159 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 GMNNO75496 209 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 THBS2P35442 1172 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 CRYBB2P43320 205 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 GLO1Q04760 184 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 CCNIQ14094 377 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 PCGF3Q3KNV8 242 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 MBNL2Q5VZF2 373 aaKnown RBP15.28■□□□□ 0.04
TPM3-220ENST00000509601 OTPQ5XKR4 325 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 PTCHD4Q6ZW05 846 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 PGAM4Q8N0Y7 254 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 RSRC1Q96IZ7 334 aaKnown RBP15.28■□□□□ 0.04
TPM3-220ENST00000509601 C4orf45Q96LM5 186 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 VSX1Q9NZR4 365 aaPredicted RBP15.28■□□□□ 0.04
TPM3-220ENST00000509601 TAGLN3Q9UI15 199 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 ARL2BPQ9Y2Y0 163 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 V9GYQ6 96 aa15.28■□□□□ 0.04
TPM3-220ENST00000509601 CDC14BO60729 498 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 MPZL1O95297 269 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 TXNDC12O95881 172 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 SDHAP31040 664 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 CDKN2AP42771 156 aaKnown RBP15.27■□□□□ 0.04
TPM3-220ENST00000509601 LMO4P61968 165 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 PPP1CBP62140 327 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 KRR1Q13601 381 aaKnown RBP15.27■□□□□ 0.04
TPM3-220ENST00000509601 GPR139Q6DWJ6 353 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 DPY19L2P2Q6ZN68 376 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 RFPL4BQ6ZWI9 263 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 C1orf174Q8IYL3 243 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 ABHD4Q8TB40 342 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 SNX33Q8WV41 574 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 IPCEF1Q8WWN9 437 aaPredicted RBP15.27■□□□□ 0.04
TPM3-220ENST00000509601 SYT4Q9H2B2 425 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 AURKCQ9UQB9 309 aa15.27■□□□□ 0.04
TPM3-220ENST00000509601 COA3Q9Y2R0 106 aaPredicted RBP15.27■□□□□ 0.04
TPM3-220ENST00000509601 RNF212BA8MTL3 300 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 FAM157AC9JC47 383 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 PHF1O43189 567 aaPredicted RBP15.26■□□□□ 0.03
TPM3-220ENST00000509601 PPIHO43447 177 aaKnown RBP15.26■□□□□ 0.03
TPM3-220ENST00000509601 SLC16A7O60669 478 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 KHDRBS3O75525 346 aaKnown RBP15.26■□□□□ 0.03
TPM3-220ENST00000509601 IGHV1-46P01743 117 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms