RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 ZNF283Q8N7M2 679 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 NSMAFQ92636 917 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 SIGLEC11Q96RL6 698 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 CPPED1Q9BRF8 314 aaPredicted RBP13.44□□□□□ -0.26
CXCL1-202ENST00000509101 ZNF426Q9BUY5 554 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 WNT5BQ9H1J7 359 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 INIPQ9NRY2 104 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 PDP1Q9P0J1 537 aaPredicted RBP13.44□□□□□ -0.26
CXCL1-202ENST00000509101 KLHL21Q9UJP4 597 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 MMP24Q9Y5R2 645 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 HOXA3O43365 443 aaPredicted RBP13.43□□□□□ -0.26
CXCL1-202ENST00000509101 TGDSO95455 350 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 TNFSF4P23510 183 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 CD80P33681 288 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 SLC18A1P54219 525 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 PAX8Q06710 450 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 CD47Q08722 323 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 CDK5R2Q13319 367 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 TTMPQ5BVD1 217 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 BLOC1S3Q6QNY0 202 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 C17orf107Q6ZR85 190 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 LRRC28Q86X40 367 aaPredicted RBP13.43□□□□□ -0.26
CXCL1-202ENST00000509101 PTOV1Q86YD1 416 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 C1orf174Q8IYL3 243 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 KIR3DL3Q8N743 410 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 OR2Z1Q8NG97 314 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 ITLN1Q8WWA0 313 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 HDAC2Q92769 488 aaKnown RBP13.43□□□□□ -0.26
CXCL1-202ENST00000509101 MPP4Q96JB8 637 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 CCT8L2Q96SF2 557 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 OR2H1Q9GZK4 316 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 ELOVL3Q9HB03 270 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 MEPEQ9NQ76 525 aaPredicted RBP13.43□□□□□ -0.26
CXCL1-202ENST00000509101 CCDC167Q9P0B6 97 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 LRCH1Q9Y2L9 728 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 GMEB1Q9Y692 573 aa13.43□□□□□ -0.26
CXCL1-202ENST00000509101 CEACAM18A8MTB9 384 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 PLATP00750 562 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 TNFRSF1AP19438 455 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 MDH2P40926 338 aaKnown RBP13.42□□□□□ -0.26
CXCL1-202ENST00000509101 AQP2P41181 271 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 MRPL19P49406 292 aaKnown RBP13.42□□□□□ -0.26
CXCL1-202ENST00000509101 ARHGDIAP52565 204 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 PSG7Q13046 419 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 ZNF774Q6NX45 483 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 BRICD5Q6PL45 260 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 Q6ZR03 302 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 ALDH16A1Q8IZ83 802 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 C11orf65Q8NCR3 313 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 MOSPD2Q8NHP6 518 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 PFN4Q8NHR9 129 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 NMD3Q96D46 503 aaKnown RBP13.42□□□□□ -0.26
CXCL1-202ENST00000509101 SAMD8Q96LT4 415 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 PKP2Q99959 881 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 PRSS27Q9BQR3 290 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 SSBP3Q9BWW4 388 aaPredicted RBP13.42□□□□□ -0.26
CXCL1-202ENST00000509101 POFUT1Q9H488 388 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 NANOGQ9H9S0 305 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 SMURF2Q9HAU4 748 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 TNFRSF19Q9NS68 423 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 PPP1R3CQ9UQK1 317 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 USH1CQ9Y6N9 552 aa13.42□□□□□ -0.26
CXCL1-202ENST00000509101 FAM181BA6NEQ2 426 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 M0QX08 132 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 POLR3GO15318 223 aaPredicted RBP13.41□□□□□ -0.26
CXCL1-202ENST00000509101 ICMTO60725 284 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 OR7A10O76100 309 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 ABHD16AO95870 558 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 CD247P20963 164 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 LAP3P28838 519 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 RAG2P55895 527 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 PAX2Q02962 417 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 TOP3AQ13472 1001 aaPredicted RBP13.41□□□□□ -0.26
CXCL1-202ENST00000509101 CYP51A1Q16850 503 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 ARMC4Q5T2S8 1044 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 EPGNQ6UW88 154 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 BTNL3Q6UXE8 466 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 BRD3OSQ6XYD6 125 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 ZER1Q7Z7L7 766 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 UPRTQ96BW1 309 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 C4orf45Q96LM5 186 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 BEX1Q9HBH7 125 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 NKIRAS1Q9NYS0 192 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 STX18Q9P2W9 335 aaKnown RBP13.41□□□□□ -0.26
CXCL1-202ENST00000509101 IL20RAQ9UHF4 553 aa13.41□□□□□ -0.26
CXCL1-202ENST00000509101 IGHV2-70DA0A0C4DH43 119 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 A0A1B0GUS0 222 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 SASH3O75995 380 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 MT-ND1P03886 318 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 PPIAL4GP0DN37 164 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 RPS2P15880 293 aaKnown RBP13.4□□□□□ -0.26
CXCL1-202ENST00000509101 FUT1P19526 365 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 GSTM3P21266 225 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 MMP16P51512 607 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 DEFB112Q30KQ8 113 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 FAM27BQ5VT28 67 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 SLC25A47Q6Q0C1 308 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 LRRN1Q6UXK5 716 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 HDXQ7Z353 690 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 MUC20Q8N307 709 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms