RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ABHD13Q7L211 337 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 SAXO1Q8IYX7 474 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 OFCC1Q8IZS5 231 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 CYB561D1Q8N8Q1 229 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 NOXO1Q8NFA2 376 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 CCDC148Q8NFR7 591 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 NUBPLQ8TB37 319 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 VPS37BQ9H9H4 285 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 RETNQ9HD89 108 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 HRASLS2Q9NWW9 162 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 GCNT4Q9P109 453 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 UXTQ9UBK9 157 aaPredicted RBP2.08□□□□□ -2.08
LSM6-205ENST00000507449 LGALS13Q9UHV8 139 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 SLC17A4Q9Y2C5 497 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 MAPK8IP3Q9UPT6 1336 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 CAMTA1Q9Y6Y1 1673 aa2.08□□□□□ -2.08
LSM6-205ENST00000507449 A0A1B0GW55 424 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 SERTM2A0A1B0GWG4 89 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 NDUFAB1O14561 156 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 SCAMP2O15127 329 aaKnown RBP2.07□□□□□ -2.08
LSM6-205ENST00000507449 CACNG3O60359 315 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 CLDN11O75508 207 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 CTAG2O75638 210 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 GABARAPO95166 117 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 DUX4L2P0CJ85 424 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 DUX4L3P0CJ86 424 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 DUX4L5P0CJ88 424 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 DUX4L6P0CJ89 424 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 DUX4L7P0CJ90 424 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 BCKDHBP21953 392 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 GALP22466 123 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 LONP1P36776 959 aaKnown RBP2.07□□□□□ -2.08
LSM6-205ENST00000507449 CEACAM6P40199 344 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 CSNK1EP49674 416 aaKnown RBP2.07□□□□□ -2.08
LSM6-205ENST00000507449 C21orf59P57076 290 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 RGS8P57771 180 aaPredicted RBP2.07□□□□□ -2.08
LSM6-205ENST00000507449 RCAN2Q14206 197 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 PRPSAP1Q14558 356 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 HSDL1Q3SXM5 330 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 PLET1Q6UQ28 207 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 MBOAT1Q6ZNC8 495 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 BZW1Q7L1Q6 419 aaKnown RBP2.07□□□□□ -2.08
LSM6-205ENST00000507449 PQLC3Q8N755 202 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 OR2A1Q8NGT9 310 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 MCUR1Q96AQ8 359 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 PRRC1Q96M27 445 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 ZNF681Q96N22 645 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 TSNARE1Q96NA8 513 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 BPIFA3Q9BQP9 254 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 VCXQ9H320 206 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 SAV1Q9H4B6 383 aaPredicted RBP2.07□□□□□ -2.08
LSM6-205ENST00000507449 C12orf10Q9HB07 376 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 PATZ1Q9HBE1 687 aaKnown RBP2.07□□□□□ -2.08
LSM6-205ENST00000507449 ISYNA1Q9NPH2 558 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 DUX4Q9UBX2 424 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 KCNE3Q9Y6H6 103 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 ASTN1O14525 1302 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 LRP4O75096 1905 aa2.07□□□□□ -2.08
LSM6-205ENST00000507449 NCBP2LA6PVI3 153 aaKnown RBP2.06□□□□□ -2.08
LSM6-205ENST00000507449 RSPH10B2B2RC85 870 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 SMKR1H3BMG3 65 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 TEX46H3BTG2 121 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 DNAJB6O75190 326 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 ENTPD5O75356 428 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 ZNF324O75467 553 aaPredicted RBP2.06□□□□□ -2.08
LSM6-205ENST00000507449 BCHEP06276 602 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 TPM2P07951 284 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 FGF4P08620 206 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 RSPH10BP0C881 870 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 UBTFL6P0CB48 400 aaPredicted RBP2.06□□□□□ -2.08
LSM6-205ENST00000507449 STOMP27105 288 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 GTF2E2P29084 291 aaKnown RBP2.06□□□□□ -2.08
LSM6-205ENST00000507449 OR1E1P30953 314 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 CSNK1A1P48729 337 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 CX3CR1P49238 355 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 SP4Q02446 784 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 MERTKQ12866 999 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 ERCC8Q13216 396 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 SLAQ13239 276 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 EIF4EBP2Q13542 120 aaPredicted RBP2.06□□□□□ -2.08
LSM6-205ENST00000507449 RGNQ15493 299 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 C1orf185Q5T7R7 199 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 ARL9Q6T311 187 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 TMEM205Q6UW68 189 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 NTM-AS1Q6ZSK4 140 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 TMEM150AQ86TG1 271 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 BIVMQ86UB2 503 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 ZNF695Q8IW36 515 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 OR10AD1Q8NGE0 317 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 LYPD6BQ8NI32 183 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 FAM81AQ8TBF8 368 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 TSEN15Q8WW01 171 aaKnown RBP2.06□□□□□ -2.08
LSM6-205ENST00000507449 MRGPRFQ96AM1 343 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 EXOSC8Q96B26 276 aaKnown RBP2.06□□□□□ -2.08
LSM6-205ENST00000507449 SEH1LQ96EE3 360 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 C11orf70Q9BRQ4 267 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 SLC25A2Q9BXI2 301 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 UBE2ZQ9H832 354 aaPredicted RBP2.06□□□□□ -2.08
LSM6-205ENST00000507449 TMEM9BQ9NQ34 198 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 LYARQ9NX58 379 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms