RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CCT3P49368 545 aaKnown RBP4.14□□□□□ -1.75
HERC4-213ENST00000506515 CAV2P51636 162 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 RIPK1Q13546 671 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 NUMA1Q14980 2115 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 MAJINQ3KP22 176 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 SFT2D3Q587I9 215 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 HES3Q5TGS1 186 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 FTMTQ8N4E7 242 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 CSGALNACT2Q8N6G5 542 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 ZNF740Q8NDX6 193 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 TMEM159Q96B96 161 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 SLC41A3Q96GZ6 507 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 SEC22AQ96IW7 307 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 ANKRD36BP1Q96IX9 119 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 TCEANC2Q96MN5 208 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 RNF2Q99496 336 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 CXCL16Q9H2A7 254 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 RBKSQ9H477 322 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 ZDHHC11Q9H8X9 412 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 PARVGQ9HBI0 331 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 V9GY05 133 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 PCDH15Q96QU1 1955 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 DOPEY2Q9Y3R5 2298 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 MYO9AB2RTY4 2548 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 TCHHQ07283 1943 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 MYH11P35749 1972 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 PTPN13Q12923 2485 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 A8MU10 97 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 MED7O43513 233 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 UGT1A9O60656 530 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 SNAPINO95295 136 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 TNNC2P02585 160 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 DNAH10OSP0CZ25 163 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 FUT3P21217 361 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 SHMT2P34897 504 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 MAGEA8P43361 318 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 APOC4P55056 127 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 GTF2BQ00403 316 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 KDSRQ06136 332 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 SPAG1Q07617 926 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 KLRB1Q12918 225 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 KLF17Q5JT82 389 aaPredicted RBP4.13□□□□□ -1.75
HERC4-213ENST00000506515 TMEM25Q86YD3 366 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 ARHGAP18Q8N392 663 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 PDCL2Q8N4E4 241 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 EID2Q8N6I1 236 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 OR4K14Q8NGD5 310 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 C7orf33Q8WU49 177 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 FBXO32Q969P5 355 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 UBE2E3Q969T4 207 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 CLCC1Q96S66 551 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 LHX5Q9H2C1 402 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 REEP4Q9H6H4 257 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 TM9SF3Q9HD45 589 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 SH2D2AQ9NP31 389 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 EXTL2Q9UBQ6 330 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 CELA1Q9UNI1 258 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 TRAF3IP3Q9Y228 551 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 COL5A1P20908 1838 aaPredicted RBP4.13□□□□□ -1.75
HERC4-213ENST00000506515 ANAPC1Q9H1A4 1944 aa4.13□□□□□ -1.75
HERC4-213ENST00000506515 MYO16Q9Y6X6 1858 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 IGKV1D-8A0A087WSZ0 117 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 ZNF233A6NK53 670 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 PCP4L1A6NKN8 68 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 ABCD4O14678 606 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 RAMP3O60896 148 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 SUPT7LO94864 414 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 CISD3P0C7P0 127 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 WARSP23381 471 aaKnown RBP4.12□□□□□ -1.75
HERC4-213ENST00000506515 CD82P27701 267 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 CCR1P32246 355 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 KLK7P49862 253 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 ATP1B3P54709 279 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 SNRPFP62306 86 aaKnown RBP4.12□□□□□ -1.75
HERC4-213ENST00000506515 SELENOTP62341 195 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 TFAMQ00059 246 aaKnown RBP4.12□□□□□ -1.75
HERC4-213ENST00000506515 BCL7AQ4VC05 210 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 SAMD4BQ5PRF9 694 aaKnown RBP4.12□□□□□ -1.75
HERC4-213ENST00000506515 C1orf220Q5T0J3 134 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 C1orf146Q5VVC0 180 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 HSDL2Q6YN16 418 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 PGAP1Q75T13 922 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 GDPD3Q7L5L3 318 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 EFL1Q7Z2Z2 1120 aaKnown RBP4.12□□□□□ -1.75
HERC4-213ENST00000506515 BHLHE23Q8NDY6 225 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 IMMP1LQ96LU5 166 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 CATSPER2Q96P56 530 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 COPS8Q99627 209 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 LLPHQ9BRT6 129 aaKnown RBP4.12□□□□□ -1.75
HERC4-213ENST00000506515 PARD6BQ9BYG5 372 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 SUDS3Q9H7L9 328 aaPredicted RBP4.12□□□□□ -1.75
HERC4-213ENST00000506515 NHEJ1Q9H9Q4 299 aaPredicted RBP4.12□□□□□ -1.75
HERC4-213ENST00000506515 FOLH1BQ9HBA9 442 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 THUMPD1Q9NXG2 353 aaKnown RBP4.12□□□□□ -1.75
HERC4-213ENST00000506515 KIF25Q9UIL4 384 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 MYLKQ15746 1914 aa4.12□□□□□ -1.75
HERC4-213ENST00000506515 BOD1L1Q8NFC6 3051 aa4.11□□□□□ -1.75
HERC4-213ENST00000506515 SPTBN1Q01082 2364 aaKnown RBP4.11□□□□□ -1.75
HERC4-213ENST00000506515 SCN1AP35498 2009 aa4.11□□□□□ -1.75
HERC4-213ENST00000506515 IGHV3OR16-13A0A075B7E8 117 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms