RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TREM2Q9NZC2 230 aa2.41□□□□□ -2.02
TRAPPC11-205ENST00000506426 ABCD2Q9UBJ2 740 aa2.41□□□□□ -2.02
TRAPPC11-205ENST00000506426 B4GALT7Q9UBV7 327 aa2.41□□□□□ -2.02
TRAPPC11-205ENST00000506426 BTNL2Q9UIR0 455 aa2.41□□□□□ -2.02
TRAPPC11-205ENST00000506426 PITPNC1Q9UKF7 332 aa2.41□□□□□ -2.02
TRAPPC11-205ENST00000506426 PSME2Q9UL46 239 aa2.41□□□□□ -2.02
TRAPPC11-205ENST00000506426 TRAF3IP3Q9Y228 551 aa2.41□□□□□ -2.02
TRAPPC11-205ENST00000506426 CACNA1GO43497 2377 aa2.41□□□□□ -2.02
TRAPPC11-205ENST00000506426 MYH6P13533 1939 aa2.4□□□□□ -2.02
TRAPPC11-205ENST00000506426 ASPMQ8IZT6 3477 aa2.4□□□□□ -2.02
TRAPPC11-205ENST00000506426 CACNA1BQ00975 2339 aa2.4□□□□□ -2.02
TRAPPC11-205ENST00000506426 CHD6Q8TD26 2715 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 NSG1A0A0A6YYJ2 146 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 TRBV11-1A0A0K0K1C0 115 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 NCF1BA6NI72 391 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR2AG2A6NM03 316 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 NCF1CA8MVU1 366 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 H0YC42 278 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 DYNC1I1O14576 645 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 CLOCKO15516 846 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 BCL2L11O43521 198 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 HCRTR1O43613 425 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 SOX15O60248 233 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 NEMFO60524 1076 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 DNAJB6O75190 326 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 CRLF1O75462 422 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 CTAG2O75638 210 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 DEXIO95424 95 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 CTDNEP1O95476 244 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 C1orf105O95561 183 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 FGF1P05230 155 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 C2P06681 752 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR4Q2P0C623 313 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 SLC2A5P22732 501 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 GATA2P23769 480 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 PRDX3P30048 256 aaKnown RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 CCR2P41597 374 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 YAP1P46937 504 aaKnown RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 SELENOTP62341 195 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 ERVK-25P63136 954 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 SPAG1Q07617 926 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 CHRNA6Q15825 494 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 PSMD5Q16401 504 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 TCTEX1D4Q5JR98 221 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 PPM1LQ5SGD2 360 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 UTF1Q5T230 341 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 LIN9Q5TKA1 542 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 C1orf146Q5VVC0 180 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 Q6ZS52 159 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 SLC25A48Q6ZT89 311 aaKnown RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 EIF3MQ7L2H7 374 aaKnown RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 HSD17B13Q7Z5P4 300 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 SLC26A11Q86WA9 606 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 MFSD6LQ8IWD5 586 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZNF100Q8IYN0 542 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 B3GNT7Q8NFL0 401 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR10H4Q8NGA5 316 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 PLPPR1Q8TBJ4 325 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 ACMSDQ8TDX5 336 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 CHCHD10Q8WYQ3 142 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR1E3Q8WZA6 343 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 TCEAL4Q96EI5 215 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 FOXN4Q96NZ1 517 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 MS4A4EQ96PG1 132 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 SMIM14Q96QK8 99 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 PANX1Q96RD7 426 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 TMEM175Q9BSA9 504 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 C20orf24Q9BUV8 137 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 DEFB126Q9BYW3 111 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 PLA2G2FQ9BZM2 168 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 IQCGQ9H095 443 aaKnown RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZNF275Q9NSD4 429 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 GIN1Q9NXP7 522 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 KCNIP1Q9NZI2 227 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 GCNT4Q9P109 453 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 NDRG2Q9UN36 371 aaKnown RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 UGT2A1Q9Y4X1 527 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 FRYLO94915 3013 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 MYH7BA7E2Y1 1941 aa2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 MAP1BP46821 2468 aaKnown RBP2.4□□□□□ -2.03
TRAPPC11-205ENST00000506426 DENND4AQ7Z401 1863 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 KMT2BQ9UMN6 2715 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 IGHV3OR16-13A0A075B7E8 117 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 A0A1W2PQ72 361 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 A6NIZ1 184 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 CASC3O15234 703 aaKnown RBP2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 H6PDO95479 791 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 IGHV3-48P01763 117 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 IGHV3-23P01764 117 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 CT62P0C5K7 136 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 RRM2P31350 389 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 ARL2P36404 184 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 CCT6AP40227 531 aaKnown RBP2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 GLP1RP43220 463 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 ARRB1P49407 418 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 DIO3P55073 304 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 FBXW4P57775 412 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 RAP1BP61224 184 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 CSNK1G2P78368 415 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 MRPS22P82650 360 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms