RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 WIPF1O43516 503 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 CDC14BO60729 498 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 TGFAP01135 160 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 FAM157CP0CG43 387 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 HSD17B1P14061 328 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 IFNA8P32881 189 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 RPL4P36578 427 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 CDKN2AP42771 156 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 KLF3P57682 345 aaPredicted RBP14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 CCL8P80075 99 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 PLP2Q04941 152 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 KRR1Q13601 381 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 FAM120AOSQ5T036 256 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 FAM166AQ6J272 317 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 ZER1Q7Z7L7 766 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 PGAM4Q8N0Y7 254 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 SLC7A6Q92536 515 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 ZNF570Q96NI8 536 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 RBP7Q96R05 134 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 CDRT15Q96T59 188 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 OR2J1Q9GZK6 312 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 MS4A5Q9H3V2 200 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 C1orf198Q9H425 327 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 NRIP3Q9NQ35 241 aa14.26□□□□□ -0.13
PDLIM7-215ENST00000506161 PRSS37A4D1T9 235 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 A6NIZ1 184 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 ZSCAN5BA6NJL1 495 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 SOCS2O14508 198 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 MSR1P21757 451 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 RAP1BP61224 184 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 RAP1AP62834 184 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 NKPD1Q17RQ9 610 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 ANKDD1AQ495B1 522 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 FAM205BPQ63HN1 556 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 RDH5Q92781 318 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 C1orf159Q96HA4 380 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 PYURFQ96I23 114 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 GPX7Q96SL4 187 aaPredicted RBP14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 SYT4Q9H2B2 425 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 HINT3Q9NQE9 182 aaKnown RBP14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 DCAF16Q9NXF7 216 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 TAGLN3Q9UI15 199 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 FBXO9Q9UK97 447 aaPredicted RBP14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 CDC42EP3Q9UKI2 254 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 COA3Q9Y2R0 106 aaPredicted RBP14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 IER3IP1Q9Y5U9 82 aa14.25□□□□□ -0.13
PDLIM7-215ENST00000506161 ANK2Q01484 3957 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 UNC119BA6NIH7 251 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 NDUFAB1O14561 156 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 ENTPD5O75356 428 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 NDUFB2O95178 105 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 PPP1R3DO95685 299 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 IGHV3-13P01766 116 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 ATP6V1B2P21281 511 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 GDI2P50395 445 aaKnown RBP14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 ERFP50548 548 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 MMP15P51511 669 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 CHN2P52757 468 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 CDH15P55291 814 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 TSTQ16762 297 aaKnown RBP14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 MEP1BQ16820 701 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 CR1LQ2VPA4 569 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 KRTAP24-1Q3LI83 254 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 AVPI1Q5T686 147 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 CYP4Z1Q86W10 505 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 DEFB107AQ8IZN7 70 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 OR1J2Q8NGS2 313 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 KLF14Q8TD94 323 aaPredicted RBP14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 BEX2Q9BXY8 128 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 BCL2L14Q9BZR8 327 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 NSRP1Q9H0G5 558 aaKnown RBP14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 VSX1Q9NZR4 365 aaPredicted RBP14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 GRHPRQ9UBQ7 328 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 KCNS2Q9ULS6 477 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 SAMD4AQ9UPU9 718 aaKnown RBP14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 TMEM5Q9Y2B1 443 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 ARL2BPQ9Y2Y0 163 aa14.24□□□□□ -0.13
PDLIM7-215ENST00000506161 ICMTO60725 284 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 PTHP01270 115 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 IGHV1-46P01743 117 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 ERCC1P07992 297 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 ACHEP22303 614 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 SDHAP31040 664 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 RAD52P43351 418 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 GPR6P46095 362 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 LMO4P61968 165 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 PPP1CBP62140 327 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 SPIBQ01892 262 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 CCDC92Q53HC0 331 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 VASH1Q7L8A9 365 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 FITM2Q8N6M3 262 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 ZNF540Q8NDQ6 660 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 ABHD4Q8TB40 342 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 C11orf40Q8WZ69 217 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 NUAK2Q9H093 628 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 SHARPINQ9H0F6 387 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 KCNN2Q9H2S1 579 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 RERGLQ9H628 205 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 TREM2Q9NZC2 230 aa14.23□□□□□ -0.13
PDLIM7-215ENST00000506161 TIMM10BQ9Y5J6 103 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms