RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	KLF14	Q8TD94	323 aa	Predicted RBP	13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	OR2H1	Q9GZK4	316 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	C20orf141	Q9NUB4	165 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	HIF3A	Q9Y2N7	669 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	FAM32A	Q9Y421	112 aa	Known RBP	13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	FBP2	O00757	339 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	PLPP2	O43688	288 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	FOXH1	O75593	365 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	LAP3	P28838	519 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	ZNF133	P52736	654 aa	Predicted RBP	13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	TNFAIP6	P98066	277 aa	Predicted RBP	13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	PSG4	Q00888	419 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	KLF10	Q13118	480 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	USP43	Q70EL4	1123 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	MICU2	Q8IYU8	434 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	KLHL36	Q8N4N3	616 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	OR51A7	Q8NH64	312 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	SLC25A40	Q8TBP6	338 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	GEMIN6	Q8WXD5	167 aa	Known RBP	13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	HDAC2	Q92769	488 aa	Known RBP	13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	POM121L2	Q96KW2	1035 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	C4orf45	Q96LM5	186 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	TSPAN32	Q96QS1	320 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	OR2J1	Q9GZK6	312 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	C7orf69	Q9H7B7	122 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	MAN2C1	Q9NTJ4	1040 aa		13.95	□□□□□ -0.18
DDR1-256	ENST00000505066	SLC22A2	O15244	555 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	AHCYL1	O43865	530 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	RGS9	O75916	674 aa	Predicted RBP	13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	GZMM	P51124	257 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	FMOD	Q06828	376 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	HSP90B2P	Q58FF3	399 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	MTX3	Q5HYI7	312 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	SPIC	Q8N5J4	248 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	MARS2	Q96GW9	593 aa	Known RBP	13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	ZNF583	Q96ND8	569 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	NTN4	Q9HB63	628 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	DDX28	Q9NUL7	540 aa	Known RBP	13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	TMEM5	Q9Y2B1	443 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	POLR1D	Q9Y2S0	133 aa		13.94	□□□□□ -0.18
DDR1-256	ENST00000505066	LOC105371242	A0A075B767	164 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	WNT9B	O14905	357 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	VENTX	O95231	258 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	IGHV1-46	P01743	117 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	IGHV2-5	P01817	119 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	IGHM	P01871	453 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	HTR5A	P47898	357 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	IFI44L	Q53G44	452 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	SLC25A47	Q6Q0C1	308 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	C1QL2	Q7Z5L3	287 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	NRM	Q8IXM6	262 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	OR5L1	Q8NGL2	311 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	UGT2A1	Q9Y4X1	527 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	MALRD1	Q5VYJ5	2156 aa		13.93	□□□□□ -0.18
DDR1-256	ENST00000505066	SGCE	O43556	437 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	SBK2	P0C263	348 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	COX5B	P10606	129 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	MAK	P20794	623 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	YAP1	P46937	504 aa	Known RBP	13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	HILS1	P60008	231 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	KRT72	Q14CN4	511 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	ZNF774	Q6NX45	483 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	SLC27A4	Q6P1M0	643 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	IGFN1	Q86VF2	1251 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	ZNF101	Q8IZC7	436 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	OFCC1	Q8IZS5	231 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	RP9	Q8TA86	221 aa	Known RBP	13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	FAM216A	Q8WUB2	273 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	FAM162A	Q96A26	154 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	NABP1	Q96AH0	204 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	ZNF570	Q96NI8	536 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	GPA33	Q99795	319 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	WNT5B	Q9H1J7	359 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	RERGL	Q9H628	205 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	SAR1A	Q9NR31	198 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	FGFR1OP2	Q9NVK5	253 aa		13.92	□□□□□ -0.18
DDR1-256	ENST00000505066	LOC100509620	A0A075B734	347 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	TRAV27	A0A087WT01	109 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	IFNL4	K9M1U5	179 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	PIP5K1C	O60331	668 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	DOK2	O60496	412 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	CCDC22	O60826	627 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	ADH4	P08319	380 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	TSPAN19	P0C672	248 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	MPV17	P39210	176 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	WNT5A	P41221	380 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	MMP15	P51511	669 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	LCN2	P80188	198 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	PRKCD	Q05655	676 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	ARMCX4	Q5H9R4	360 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	DNM1P34	Q6PK57	102 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	OR2Z1	Q8NG97	314 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	DCLRE1C	Q96SD1	692 aa	Known RBP	13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	HOPX	Q9BPY8	73 aa	Predicted RBP	13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	MRI1	Q9BV20	369 aa		13.91	□□□□□ -0.18

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