RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ZNF35P13682 527 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 STOMP27105 288 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 GCH1P30793 250 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 FMO3P31513 532 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 GRK5P34947 590 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 PPOXP50336 477 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 SLC25A1P53007 311 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 ATP5J2P56134 94 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 PIGFQ07326 219 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 ATP6AP1Q15904 470 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF718Q3SXZ3 478 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 MESTQ5EB52 335 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 RGS7BPQ6MZT1 257 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-220ENST00000505005 LEG1Q6P5S2 330 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 IGFN1Q86VF2 1251 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 PARP8Q8N3A8 854 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 LRRC18Q8N456 261 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 OR52E2Q8NGJ4 325 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 SNX33Q8WV41 574 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF837Q96EG3 531 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-220ENST00000505005 CENPNQ96H22 339 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-220ENST00000505005 DIRC2Q96SL1 478 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 FEVQ99581 238 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 SH3GL3Q99963 347 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 HDHD2Q9H0R4 259 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 SYT4Q9H2B2 425 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 C8orf4Q9NR00 106 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 TBCCD1Q9NVR7 557 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 B9D1Q9UPM9 204 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 ADAM18Q9Y3Q7 739 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 ATP6V1G2-DDX39BF2Z307 99 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 BHLHE40O14503 412 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 SGCEO43556 437 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 SYNGR3O43761 229 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 SLC2A10O95528 541 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 PPP1R3DO95685 299 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 PLAUP00749 431 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 HLA-DQA2P01906 255 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 MMP7P09237 267 aaPredicted RBP8.54□□□□□ -1.04
NR1I3-220ENST00000505005 ANPEPP15144 967 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 HIST1H1CP16403 213 aaKnown RBP8.54□□□□□ -1.04
NR1I3-220ENST00000505005 SLC15A1P46059 708 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 PTH2RP49190 550 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 EFNA4P52798 201 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 NUDT6P53370 316 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 UCP2P55851 309 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 TEKQ02763 1124 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 RUNX1T1Q06455 604 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.54□□□□□ -1.04
NR1I3-220ENST00000505005 SNTB2Q13425 540 aaKnown RBP8.54□□□□□ -1.04
NR1I3-220ENST00000505005 RAB39AQ14964 217 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 TESK1Q15569 626 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 PCGF3Q3KNV8 242 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 PABPC1L2AQ5JQF8 200 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 SLC35D3Q5M8T2 416 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 SHFQ7M4L6 423 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 TGIF2LYQ8IUE0 185 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 PQLC1Q8N2U9 271 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 OR9Q2Q8NGE9 314 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 LILRB1Q8NHL6 650 aaPredicted RBP8.54□□□□□ -1.04
NR1I3-220ENST00000505005 RHNO1Q9BSD3 238 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 OR2H1Q9GZK4 316 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 NUAK2Q9H093 628 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 FN3KQ9H479 309 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 NOX3Q9HBY0 568 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 PAPOLBQ9NRJ5 636 aaKnown RBP8.54□□□□□ -1.04
NR1I3-220ENST00000505005 CMC2Q9NRP2 79 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 PLEK2Q9NYT0 353 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 H2AFY2Q9P0M6 372 aaPredicted RBP8.54□□□□□ -1.04
NR1I3-220ENST00000505005 NOP16Q9Y3C1 178 aaKnown RBP8.54□□□□□ -1.04
NR1I3-220ENST00000505005 DCHS2Q6V1P9 2916 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 CADP27708 2225 aa8.54□□□□□ -1.04
NR1I3-220ENST00000505005 RAI1Q7Z5J4 1906 aaPredicted RBP8.54□□□□□ -1.04
NR1I3-220ENST00000505005 PLSCR5A0PG75 271 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 SNTNA6NMZ2 147 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 PRR23D1E9PI22 279 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-220ENST00000505005 H3BNX3 289 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 PRODHO43272 600 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 F12P00748 615 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-220ENST00000505005 OR4A8P0C604 315 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 PRR23D2P0DMB1 279 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-220ENST00000505005 CD99P14209 185 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 SELEP16581 610 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF23P17027 643 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF32P17041 273 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 CDKN2AP42771 156 aaKnown RBP8.53□□□□□ -1.04
NR1I3-220ENST00000505005 RAD23AP54725 363 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 SWI5Q1ZZU3 235 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 PGGHGQ32M88 737 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 TEX30Q5JUR7 227 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 CLEC2AQ6UVW9 174 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 THSD4Q6ZMP0 1018 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 PROKR2Q8NFJ6 384 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 OR4K13Q8NH42 304 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 SYNPRQ8TBG9 265 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 IGFBPL1Q8WX77 278 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 SPTSSAQ969W0 71 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 MRPL24Q96A35 216 aaKnown RBP8.53□□□□□ -1.04
NR1I3-220ENST00000505005 NABP1Q96AH0 204 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 RASD2Q96D21 266 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms