RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PEX11BO96011 259 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 OR8U9P0C7N5 309 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 RAB40BQ12829 278 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 RAB35Q15286 201 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 CCDC6Q16204 474 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 PGGHGQ32M88 737 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 CCDC58Q4VC31 144 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 ASB18Q6ZVZ8 466 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 SSX7Q7RTT5 188 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 OR5L1Q8NGL2 311 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 OR6K2Q8NGY2 324 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 THAP6Q8TBB0 222 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 CASTOR1Q8WTX7 329 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 KCTD7Q96MP8 289 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 MED18Q9BUE0 208 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 PARD6AQ9NPB6 346 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 MEPEQ9NQ76 525 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-204ENST00000504430 MCUBQ9NWR8 336 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-204ENST00000504430 RALGAPA1Q6GYQ0 2036 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 A0A0B4J2E0 115 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 ZCWPW2A0A1B0GU75 182 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 A0A1B0GX12 115 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 ACOX3O15254 700 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 TTC4O95801 387 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 ANGPTL1O95841 491 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 IGHG4P01861 327 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 PVRP15151 417 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 HILS1P60008 231 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 DUSP5Q16690 384 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 RBM48Q5RL73 367 aaKnown RBP4.43□□□□□ -1.7
NIPBL-204ENST00000504430 NT5DC3Q86UY8 548 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 STPG2Q8N412 459 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 DLX4Q92988 240 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-204ENST00000504430 SCGB3A2Q96PL1 93 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 SORT1Q99523 831 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 SDHCQ99643 169 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-204ENST00000504430 SLC35A5Q9BS91 424 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 NXF2Q9GZY0 626 aaKnown RBP4.43□□□□□ -1.7
NIPBL-204ENST00000504430 IMPAD1Q9NX62 359 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 ACOT9Q9Y305 439 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 OARD1Q9Y530 152 aa4.43□□□□□ -1.7
NIPBL-204ENST00000504430 BAZ1BQ9UIG0 1483 aaKnown RBP4.43□□□□□ -1.7
NIPBL-204ENST00000504430 MEIOCA2RUB1 952 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 HPNP05981 417 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 C2P06681 752 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 FUT3P21217 361 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 OPRD1P41143 372 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 REG1BP48304 166 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 HOXA1P49639 335 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-204ENST00000504430 PGFP49763 221 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 UBE2E1P51965 193 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 PSMD5Q16401 504 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 LRRC75BQ2VPJ9 315 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 FRMPD2BQ6IN97 320 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 GDPD3Q7L5L3 318 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 TMEM219Q86XT9 240 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 IQCF1Q8N6M8 205 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 MRGPRDQ8TDS7 321 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 TMEM255BQ8WV15 326 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 UBE2E2Q96LR5 201 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 FAM173AQ9BQD7 235 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 ZNF717Q9BY31 904 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-204ENST00000504430 HES7Q9BYE0 225 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 OR51B5Q9H339 312 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 SLC17A6Q9P2U8 582 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 MUTYHQ9UIF7 546 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 A0A1B0GU03 582 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 TSPAN11A1L157 253 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 SRRM3A6NNA2 597 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-204ENST00000504430 GABRPO00591 440 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 WNT9BO14905 357 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 FADS1O60427 444 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 CLDN14O95500 239 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 SSTR5P35346 364 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 CD300CQ08708 224 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 TRAM1Q15629 374 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 SPIN4Q56A73 249 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 FAM199XQ6PEV8 388 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-204ENST00000504430 CD200R1LQ6Q8B3 271 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 CBLN2Q8IUK8 224 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 DUSP18Q8NEJ0 188 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 CRYGNQ8WXF5 182 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 FAM210BQ96KR6 192 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 CDCA3Q99618 268 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-204ENST00000504430 PECRQ9BY49 303 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 B3GNT2Q9NY97 397 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 TAS2R16Q9NYV7 291 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 THYN1Q9P016 225 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 GSKIPQ9P0R6 139 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 ARL2BPQ9Y2Y0 163 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 ZNF337Q9Y3M9 751 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 TMEM56-RWDD3S4R434 201 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 PRDM2Q13029 1718 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 PCDH11XQ9BZA7 1347 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 WDR81Q562E7 1941 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 CENPVL3A0A0U1RRI6 287 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 CDIPTO14735 213 aa4.42□□□□□ -1.7
NIPBL-204ENST00000504430 ZNHIT1O43257 154 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms