RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 IL23RQ5VWK5 629 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 RNF165Q6ZSG1 346 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 NET1Q7Z628 596 aaPredicted RBP10.24□□□□□ -0.77
LSM6-204ENST00000504181 MOGAT3Q86VF5 341 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 ATG16L2Q8NAA4 619 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 SDR9C7Q8NEX9 313 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 OR10AD1Q8NGE0 317 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 MEGF10Q96KG7 1140 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 ASPNQ9BXN1 380 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 CCNB1IP1Q9NPC3 277 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 ZNF443Q9Y2A4 671 aaPredicted RBP10.24□□□□□ -0.77
LSM6-204ENST00000504181 TMEM233B4DJY2 109 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 RNASET2O00584 256 aaKnown RBP10.23□□□□□ -0.77
LSM6-204ENST00000504181 ANGPTL7O43827 346 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 QDPRP09417 244 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 NR2F1P10589 423 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 ZNF32P17041 273 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 PSMB10P40306 273 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 ARHGDIAP52565 204 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 NAA20P61599 178 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 KANK2Q63ZY3 851 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 C5orf46Q6UWT4 87 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 ZYG11AQ6WRX3 759 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 PXKQ7Z7A4 578 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 NPRL2Q8WTW4 380 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 TWIST2Q8WVJ9 160 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 NSMAFQ92636 917 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 ZNF566Q969W8 418 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 PPP3R2Q96LZ3 170 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 NAPGQ99747 312 aaPredicted RBP10.23□□□□□ -0.77
LSM6-204ENST00000504181 NKX3-1Q99801 234 aaPredicted RBP10.23□□□□□ -0.77
LSM6-204ENST00000504181 SLC35A5Q9BS91 424 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 SMURF1Q9HCE7 757 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 SERTAD4Q9NUC0 356 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 MKS1Q9NXB0 559 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 ERVK-18Q9QC07 812 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 RPS6KB2Q9UBS0 482 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 DNAJB11Q9UBS4 358 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 ZNF180Q9UJW8 692 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 TMCC3Q9ULS5 477 aa10.23□□□□□ -0.77
LSM6-204ENST00000504181 LRRC30A6NM36 301 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 LRRN3E7EW58 273 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 NPFFO15130 113 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 BGLAPP02818 100 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 GSTM3P21266 225 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 PAFAH1B1P43034 410 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 ERFP50548 548 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 ZNF84P51523 738 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 DLX1P56177 255 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 HOXA4Q00056 320 aaPredicted RBP10.22□□□□□ -0.77
LSM6-204ENST00000504181 KLRD1Q13241 179 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 SLC35D2Q76EJ3 337 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 LCA5Q86VQ0 697 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 C1orf87Q8N0U7 546 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 OR5AS1Q8N127 324 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 PNKDQ8N490 385 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 FNDC5Q8NAU1 212 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 OR6X1Q8NH79 312 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 C4orf45Q96LM5 186 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 MOGAT1Q96PD6 335 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 ZNF607Q96SK3 696 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 KCNN2Q9H2S1 579 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 ELOVL3Q9HB03 270 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 SIRT7Q9NRC8 400 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 TBK1Q9UHD2 729 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 EMCNQ9ULC0 261 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 UTP11Q9Y3A2 253 aaKnown RBP10.22□□□□□ -0.77
LSM6-204ENST00000504181 CHST2Q9Y4C5 530 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 MAB21L2Q9Y586 359 aa10.22□□□□□ -0.77
LSM6-204ENST00000504181 A0A1B0GVI7 797 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 MEIOCA2RUB1 952 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 PLPP3O14495 311 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 OR10H3O60404 316 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 FSTL3O95633 263 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 CCDC159P0C7I6 412 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 PGA4P0DJD7 388 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 PGA3P0DJD8 388 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 ADORA3P0DMS8 318 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 ZNF26P17031 533 aaPredicted RBP10.21□□□□□ -0.77
LSM6-204ENST00000504181 KITLGP21583 273 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 EEF1B2P24534 225 aaKnown RBP10.21□□□□□ -0.77
LSM6-204ENST00000504181 SAA4P35542 130 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 PMELP40967 661 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 ERVK-25P63136 954 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 PSG4Q00888 419 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 RNF220Q5VTB9 566 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 LRRC34Q8IZ02 419 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 C10orf53Q8N6V4 93 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 WIPF2Q8TF74 440 aaPredicted RBP10.21□□□□□ -0.77
LSM6-204ENST00000504181 CMBLQ96DG6 245 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 OR5M11Q96RB7 305 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 SSX3Q99909 188 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 DCTN5Q9BTE1 182 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 FUT8Q9BYC5 575 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 NPFFR1Q9GZQ6 430 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 ZNF702PQ9H963 129 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 INPP5EQ9NRR6 644 aa10.21□□□□□ -0.77
LSM6-204ENST00000504181 MRPL39Q9NYK5 338 aaKnown RBP10.21□□□□□ -0.77
LSM6-204ENST00000504181 ELOVL7A1L3X0 281 aa10.2□□□□□ -0.78
LSM6-204ENST00000504181 MEGF11A6BM72 1044 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms