RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 BOD1Q96IK1 185 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 HRASLS5Q96KN8 279 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 DACH2Q96NX9 599 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 SH3GL3Q99963 347 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 NMNAT2Q9BZQ4 307 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 OR51V1Q9H2C8 321 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 SIAEQ9HAT2 523 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 SLC24A3Q9HC58 644 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 OBP2BQ9NPH6 170 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 POLE4Q9NR33 117 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 ZNF226Q9NYT6 803 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 CRIM1Q9NZV1 1036 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 ST6GALNAC2Q9UJ37 374 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 GMPPBQ9Y5P6 360 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 SLC25A15Q9Y619 301 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 CUBNO60494 3623 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 PKD1L1Q8TDX9 2849 aa8.76□□□□□ -1.01
NUP54-203ENST00000504173 ZANQ9Y493 2812 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 LOC100130705A0A1B0GUX0 176 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 DLGAP1O14490 977 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 TLX2O43763 284 aaPredicted RBP8.75□□□□□ -1.01
NUP54-203ENST00000504173 UBL3O95164 117 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 GPANK1O95872 356 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 HLA-HP01893 362 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 THBDP07204 575 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 EPXP11678 715 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 CD79AP11912 226 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 SPI1P17947 270 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 PTDSS1P48651 473 aaKnown RBP8.75□□□□□ -1.01
NUP54-203ENST00000504173 RPS7P62081 194 aaKnown RBP8.75□□□□□ -1.01
NUP54-203ENST00000504173 KLHL12Q53G59 568 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 C1QTNF12Q5T7M4 302 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 FBXW10Q5XX13 1052 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 C22orf34Q6ZV56 151 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 SLC16A14Q7RTX9 510 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 TMEM200AQ86VY9 491 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 SKA3Q8IX90 412 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 DEPDC4Q8N2C3 294 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 DHRSXQ8N5I4 330 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 OR10H5Q8NGA6 315 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 OR8J1Q8NGP2 316 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 OR6K6Q8NGW6 343 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 CYGBQ8WWM9 190 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 C11orf40Q8WZ69 217 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 MBD6Q96DN6 1003 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 IL4I1Q96RQ9 567 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 PITX2Q99697 317 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 HCAR1Q9BXC0 346 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 KCNN2Q9H2S1 579 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 RNF121Q9H920 327 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 EMC7Q9NPA0 242 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 CCNB1IP1Q9NPC3 277 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 NGBQ9NPG2 151 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 FAM118AQ9NWS6 357 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 H2AFY2Q9P0M6 372 aaPredicted RBP8.75□□□□□ -1.01
NUP54-203ENST00000504173 POLR1DQ9Y2S0 133 aa8.75□□□□□ -1.01
NUP54-203ENST00000504173 TVP23AA6NH52 213 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 E9PQ18 207 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 SLC16A6O15403 523 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 PRODHO43272 600 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 GLCEO94923 617 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 MPZL1O95297 269 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 RAB36O95755 333 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 CST2P09228 141 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 PATE4P0C8F1 98 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 GAAP10253 952 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 ZNF823P16415 610 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 CRYGSP22914 178 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 PAX7P23759 505 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 PCSK6P29122 969 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 FMO3P31513 532 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 ZNF83P51522 516 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 BLVRAP53004 296 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 AQP4P55087 323 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 TEKQ02763 1124 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 HSF2Q03933 536 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 PIGFQ07326 219 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 KEAP1Q14145 624 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 MEP1BQ16820 701 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 GSG1Q2KHT4 349 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 SLC36A2Q495M3 483 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 FAM27BQ5VT28 67 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 TTC23Q5W5X9 447 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 OTPQ5XKR4 325 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 TMEM53Q6P2H8 277 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 DPPA2Q7Z7J5 298 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 MDP1Q86V88 176 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 WFDC11Q8NEX6 87 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 BBS1Q8NFJ9 593 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 SLC26A10Q8NG04 563 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 PTP4A1Q93096 173 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 APOL4Q9BPW4 351 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 ADI1Q9BV57 179 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 ZNF416Q9BWM5 594 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 C1QTNF6Q9BXI9 259 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 MOV10Q9HCE1 1003 aaKnown RBP8.74□□□□□ -1.01
NUP54-203ENST00000504173 ZNF224Q9NZL3 707 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 KCNN3Q9UGI6 736 aa8.74□□□□□ -1.01
NUP54-203ENST00000504173 NDRG4Q9ULP0 352 aaKnown RBP8.74□□□□□ -1.01
NUP54-203ENST00000504173 ZNF503-AS2A6NEH8 195 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms