RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 MRPS34P82930 218 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 PSG4Q00888 419 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 EGR3Q06889 387 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 SWT1Q5T5J6 900 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 DHRS7BQ6IAN0 325 aaPredicted RBP13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 OGFOD2Q6N063 350 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 DHRS4L2Q6PKH6 230 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 Q6ZTK2 550 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 NOXO1Q8NFA2 376 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 C4orf45Q96LM5 186 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 ZNF607Q96SK3 696 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 DPAGT1Q9H3H5 408 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 NANSQ9NR45 359 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 AIG1Q9NVV5 245 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 AURKAIP1Q9NWT8 199 aaPredicted RBP13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 ZNF816-ZNF321PA0A0X1KG74 233 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 PHYHO14832 338 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 GPR37O15354 613 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 TOX4O94842 621 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 HIST1H2ABP04908 130 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 IL6P05231 212 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 SFTPBP07988 381 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 ALDOCP09972 364 aaKnown RBP13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 NUDT7P0C024 238 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 CDAP32320 146 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 CFHR2P36980 270 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 RPL14P50914 215 aaKnown RBP13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 ERVK-25P63136 954 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 HERPUD1Q15011 391 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 SGCAQ16586 387 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 ZNF404Q494X3 552 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 C10orf128Q5T292 105 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 WDR25Q64LD2 544 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 HIST3H2AQ7L7L0 130 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 COMTD1Q86VU5 262 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 LDLRAD3Q86YD5 345 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 NUDCD3Q8IVD9 361 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 NPEPL1Q8NDH3 523 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 ZNF420Q8TAQ5 688 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 HIST1H2ACQ93077 130 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 MAL2Q969L2 176 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 SPATA5L1Q9BVQ7 753 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 CDADC1Q9BWV3 514 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 RAP2CQ9Y3L5 183 aa13.14□□□□□ -0.31
PDLIM7-210ENST00000503827 TLDC2A0PJX2 215 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 CENPBD1B2RD01 187 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 ZNF879B4DU55 563 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 MCIDASD6RGH6 385 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 TPST1O60507 370 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 TSPAN9O75954 239 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 CH25HO95992 272 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 CYB5R3P00387 301 aaPredicted RBP13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 KITLGP21583 273 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 TUBG1P23258 451 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 ZNF133P52736 654 aaPredicted RBP13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 RGNQ15493 299 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 ZNF74Q16587 644 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 GTDC1Q4AE62 458 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 RUNDC3AQ59EK9 446 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 OXLD1Q5BKU9 147 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 RANBP3LQ86VV4 465 aaPredicted RBP13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 KRT73Q86Y46 540 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 SCCPDHQ8NBX0 429 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 NABP1Q96AH0 204 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 VPS33AQ96AX1 596 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 MRPL13Q9BYD1 178 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 RAD21L1Q9H4I0 556 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 TUBG2Q9NRH3 451 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 SLC13A4Q9UKG4 626 aa13.13□□□□□ -0.31
PDLIM7-210ENST00000503827 IGHV1-69DA0A0B4J2H0 117 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 TRMUO75648 421 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 FSTL3O95633 263 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 ABHD16AO95870 558 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 IGHV1-69P01742 117 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 LIPFP07098 398 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 ACADSP16219 412 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 ABCE1P61221 599 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 HHATQ5VTY9 493 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 LINC00114Q6XXX2 140 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 HDDC2Q7Z4H3 204 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 KIRREL3Q8IZU9 778 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 C1orf87Q8N0U7 546 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 GALNT4Q8N4A0 578 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 C10orf82Q8WW14 230 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 ITCHQ96J02 903 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 TBX15Q96SF7 602 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 SEPHS2Q99611 448 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 OR2H1Q9GZK4 316 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 WNT5BQ9H1J7 359 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 RMND5AQ9H871 391 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 MEAF6Q9HAF1 191 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 SLCO1B3Q9NPD5 702 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 ZNF229Q9UJW7 825 aa13.12□□□□□ -0.31
PDLIM7-210ENST00000503827 A0A0U1RQK1 487 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 A0A1W2PRG6 482 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 BTBD17A6NE02 478 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 LRRC30A6NM36 301 aa13.11□□□□□ -0.31
PDLIM7-210ENST00000503827 C22orf46C9J442 243 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms