RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 BABAM2Q9NXR7 383 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 MRM2Q9UI43 246 aaKnown RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 NPIPA1Q9UND3 350 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 B3GALT5Q9Y2C3 310 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 HDGFL3Q9Y3E1 203 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 DNAJC13O75165 2243 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 BSNQ9UPA5 3926 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 A0A1W2PNV4 684 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 IRGMA1A4Y4 181 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 H3BSH0 61 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 XKRYO14609 159 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 BET1O15155 118 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 SMAD9O15198 467 aaKnown RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 KLK10O43240 276 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 NOS1APO75052 506 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 TSPAN9O75954 239 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 GLSO94925 669 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 PDGFAP04085 211 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 OR8G3PP0DMU2 310 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 ANOS1P23352 680 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 IL32P24001 234 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 SOX6P35712 828 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 RPS19P39019 145 aaKnown RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 CASRP41180 1078 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 RFX2P48378 723 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 NANOS3P60323 173 aaKnown RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 ARG2P78540 354 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 SLC3A1Q07837 685 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 FAPQ12884 760 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 TNK1Q13470 666 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 SLC35D3Q5M8T2 416 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 TMEM225Q6GV28 225 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 CORO6Q6QEF8 472 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 ARL9Q6T311 187 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 CDC20BQ86Y33 519 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 PPP1R14AQ96A00 147 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 ORAI1Q96D31 301 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 ZNF837Q96EG3 531 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 SMAD5Q99717 465 aaKnown RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 SLC30A2Q9BRI3 323 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 MRPL13Q9BYD1 178 aaKnown RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 BARHL1Q9BZE3 327 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 DEFB127Q9H1M4 99 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 NARFLQ9H6Q4 476 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 RANGRFQ9HD47 186 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 C12orf4Q9NQ89 552 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 TXNL4BQ9NX01 149 aaKnown RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 B3GNT2Q9NY97 397 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 ZMAT5Q9UDW3 170 aaKnown RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 ST6GALNAC2Q9UJ37 374 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 GNG8Q9UK08 70 aa6.5□□□□□ -1.37
CPNE4-202ENST00000502818 TNRC6AQ8NDV7 1962 aaKnown RBP6.5□□□□□ -1.37
CPNE4-202ENST00000502818 PHF3Q92576 2039 aaKnown RBP6.49□□□□□ -1.37
CPNE4-202ENST00000502818 LEUTXA8MZ59 168 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 ZNF593O00488 134 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-202ENST00000502818 DOK2O60496 412 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 RPP14O95059 124 aaKnown RBP6.49□□□□□ -1.37
CPNE4-202ENST00000502818 PMS2P2O95744 297 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 HLA-DQA2P01906 255 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 OR2T7P0C7T2 308 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 ZNF17P17021 662 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 HLA-DMAP28067 261 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 PTGS2P35354 604 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 GZMKP49863 264 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 CLDN17P56750 224 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 SOX8P57073 446 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 MXD1Q05195 221 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 C1DQ13901 141 aaKnown RBP6.49□□□□□ -1.37
CPNE4-202ENST00000502818 CRTC2Q53ET0 693 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-202ENST00000502818 ZNF766Q5HY98 468 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 FAM205BPQ63HN1 556 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 HBMQ6B0K9 141 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 LRFN4Q6PJG9 635 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 CREB3L2Q70SY1 520 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 SLC16A9Q7RTY1 509 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 LINC00346Q8IVM7 164 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 UEVLDQ8IX04 471 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 POMGNT2Q8NAT1 580 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 OR2T4Q8NH00 348 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 OR2T27Q8NH04 317 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 OR10D3Q8NH80 312 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 SLC25A43Q8WUT9 341 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-202ENST00000502818 THAP4Q8WY91 577 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 HAS2Q92819 552 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 PGLYRP3Q96LB9 341 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 CEP19Q96LK0 163 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 OXGR1Q96P68 337 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 FAM117AQ9C073 453 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 NIPAL2Q9H841 368 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 FANCFQ9NPI8 374 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 C14orf119Q9NWQ9 140 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 SLCO1C1Q9NYB5 712 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 STUB1Q9UNE7 303 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 KCNMB2Q9Y691 235 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 ACACAQ13085 2346 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 ANKRD11Q6UB99 2663 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-202ENST00000502818 A0A1W2PPK0 400 aa6.49□□□□□ -1.37
CPNE4-202ENST00000502818 NCR1O76036 304 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms