RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 ARL8AQ96BM9 186 aa3.52□□□□□ -1.85
CSTF1-207ENST00000498689 ZNF669Q96BR6 464 aaPredicted RBP3.52□□□□□ -1.85
CSTF1-207ENST00000498689 ELP4Q96EB1 424 aa3.52□□□□□ -1.85
CSTF1-207ENST00000498689 PDLIM5Q96HC4 596 aaKnown RBP3.52□□□□□ -1.85
CSTF1-207ENST00000498689 SRSF8Q9BRL6 282 aaKnown RBP3.52□□□□□ -1.85
CSTF1-207ENST00000498689 ACTRT3Q9BYD9 372 aa3.52□□□□□ -1.85
CSTF1-207ENST00000498689 TRIM5Q9C035 493 aa3.52□□□□□ -1.85
CSTF1-207ENST00000498689 TNFRSF12AQ9NP84 129 aa3.52□□□□□ -1.85
CSTF1-207ENST00000498689 ABCB10Q9NRK6 738 aa3.52□□□□□ -1.85
CSTF1-207ENST00000498689 DDX18Q9NVP1 670 aaKnown RBP3.52□□□□□ -1.85
CSTF1-207ENST00000498689 MKS1Q9NXB0 559 aa3.52□□□□□ -1.85
CSTF1-207ENST00000498689 FBXL17Q9UF56 701 aa3.52□□□□□ -1.85
CSTF1-207ENST00000498689 PITPNC1Q9UKF7 332 aa3.52□□□□□ -1.85
CSTF1-207ENST00000498689 ZDHHC9Q9Y397 364 aa3.52□□□□□ -1.85
CSTF1-207ENST00000498689 SF3B6Q9Y3B4 125 aaKnown RBP3.52□□□□□ -1.85
CSTF1-207ENST00000498689 IGHV3OR15-7A0A075B7D8 119 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 TMED7-TICAM2A0A0A6YYA0 188 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 TCRBV7S3A2A0A539 114 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 FAM90A8PA6NJQ4 464 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 IFNL4K9M1U5 179 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 SPOPO43791 374 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 EIF4E2O60573 245 aaKnown RBP3.51□□□□□ -1.85
CSTF1-207ENST00000498689 CNIH1O95406 144 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 AHSGP02765 367 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 PLA2G1BP04054 148 aaKnown RBP3.51□□□□□ -1.85
CSTF1-207ENST00000498689 INHBAP08476 426 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 H2AFZP0C0S5 128 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 EGR2P11161 476 aaPredicted RBP3.51□□□□□ -1.85
CSTF1-207ENST00000498689 UBL4AP11441 157 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 HSD17B3P37058 310 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 NCBP2P52298 156 aaKnown RBP eCLIP3.51□□□□□ -1.852e-9■■□□□ 12.2
CSTF1-207ENST00000498689 PPP1CBP62140 327 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 MAB21L1Q13394 359 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 SEC23BQ15437 767 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 SSX2Q16385 188 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 ZNF181Q2M3W8 571 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 HSP90AA5PQ58FG0 334 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 XKR7Q5GH72 579 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 ZMAT1Q5H9K5 638 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 SOHLH1Q5JUK2 328 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 PDZK1Q5T2W1 519 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 Q6ZRM9 215 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 H2AFVQ71UI9 128 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 OLIG3Q7RTU3 272 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 FAM90A1Q86YD7 464 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 SLC30A8Q8IWU4 369 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 MKXQ8IYA7 352 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 OR5AS1Q8N127 324 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 METTL4Q8N3J2 472 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 ATG16L2Q8NAA4 619 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 OR6Y1Q8NGX8 325 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 ARPC1AQ92747 370 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 GIMAP5Q96F15 307 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 FOXB1Q99853 325 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 EMC6Q9BV81 110 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 GLIPR2Q9H4G4 154 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 PIF1Q9H611 641 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 SLC35C2Q9NQQ7 365 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 UFSP2Q9NUQ7 469 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 ERVK13-1Q9NX77 482 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 BFARQ9NZS9 450 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 CGGBP1Q9UFW8 167 aaPredicted RBP3.51□□□□□ -1.85
CSTF1-207ENST00000498689 KCNE5Q9UJ90 142 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 FBXL3Q9UKT7 428 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 POFUT2Q9Y2G5 429 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 TMED7Q9Y3B3 224 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 RNF11Q9Y3C5 154 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 FBXO7Q9Y3I1 522 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 LRP12Q9Y561 859 aa3.51□□□□□ -1.85
CSTF1-207ENST00000498689 SPIN1Q9Y657 262 aaPredicted RBP3.51□□□□□ -1.85
CSTF1-207ENST00000498689 LRRC30A6NM36 301 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 LINC01548A6NM66 108 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 NPIPB9F8W1W9 429 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 RGS13O14921 159 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 SURF4O15260 269 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 PSTPIP1O43586 416 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 SEMA3DO95025 777 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 CCDC175P0C221 793 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 UBTFL6P0CB48 400 aaPredicted RBP3.5□□□□□ -1.85
CSTF1-207ENST00000498689 ZSCAN5DPP0CG00 497 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 COX7A1P24310 79 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 STIP1P31948 543 aaKnown RBP3.5□□□□□ -1.85
CSTF1-207ENST00000498689 FDFT1P37268 417 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 CDX1P47902 265 aaPredicted RBP3.5□□□□□ -1.85
CSTF1-207ENST00000498689 CLK1P49759 484 aaKnown RBP3.5□□□□□ -1.85
CSTF1-207ENST00000498689 GNB1P62873 340 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 SLC7A5Q01650 507 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 ACSM2AQ08AH3 577 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 BNIP2Q12982 314 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 OR4D1Q15615 310 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 MPPED2Q15777 294 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 PRAMEF6Q5VXH4 476 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 SLC16A14Q7RTX9 510 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 C20orf196Q8IYI0 205 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 C1orf87Q8N0U7 546 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 MIER2Q8N344 545 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 SLC22A24Q8N4F4 322 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 DEFB125Q8N687 156 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 FAM216BQ8N7L0 139 aa3.5□□□□□ -1.85
CSTF1-207ENST00000498689 TRPC4APQ8TEL6 797 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms