RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 HDDC2Q7Z4H3 204 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 MDGA2Q7Z553 956 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 ADCK1Q86TW2 530 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 P2RY8Q86VZ1 359 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 BEST3Q8N1M1 668 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 GTPBP8Q8N3Z3 284 aaPredicted RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 GALNT16Q8N428 558 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 ACBD7Q8N6N7 88 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 ARIH2OSQ8N7S6 290 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 LRRC75AQ8NAA5 344 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 POMGNT2Q8NAT1 580 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 NPEPL1Q8NDH3 523 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 ADPRHL1Q8NDY3 354 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 SDR9C7Q8NEX9 313 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 OR51G2Q8NGK0 314 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 OR2T4Q8NH00 348 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 OR52N1Q8NH53 320 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 POC1BQ8TC44 478 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 CPT1CQ8TCG5 803 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 CHPT1Q8WUD6 406 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF524Q96C55 264 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 YIPF6Q96EC8 236 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 Q96M85 177 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 C5orf34Q96MH7 638 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 AGAP4Q96P64 663 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 NMNAT3Q96T66 252 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 MGLLQ99685 303 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 KLHDC3Q9BQ90 382 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 FAM173AQ9BQD7 235 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 PIGQQ9BRB3 760 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 NAA11Q9BSU3 229 aaPredicted RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 PTDSS2Q9BVG9 487 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 OR11A1Q9GZK7 315 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC6A15Q9H2J7 730 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 TXNIPQ9H3M7 391 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 MED20Q9H944 212 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 PROK2Q9HC23 129 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 CHST11Q9NPF2 352 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 KLHL1Q9NR64 748 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 ALKBH4Q9NXW9 302 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 TAS2R5Q9NYW4 299 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 B4GALT7Q9UBV7 327 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 ENPP5Q9UJA9 477 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 FBXL2Q9UKC9 423 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 BOKQ9UMX3 212 aaPredicted RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 TP53TG5Q9Y2B4 290 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 B3GALT5Q9Y2C3 310 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 RPH3AQ9Y2J0 694 aaPredicted RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 CAB39Q9Y376 341 aaPredicted RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 ADAM18Q9Y3Q7 739 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 NOX1Q9Y5S8 564 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 NBEAL1Q6ZS30 2694 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 TEX13CA0A0J9YWL9 993 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OR2M5A3KFT3 312 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OR6C68A6NDL8 312 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ARGFXA6NJG6 315 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 NPIPB13A6NJU9 1138 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 LIPT2A6NK58 231 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF891A8MT65 544 aaPredicted RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 C12orf71A8MTZ7 269 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 NPIPB4C9JG80 1138 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 NPIPA5E9PKD4 350 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 G3V3Y1 287 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 MS4A18H0YCH9 400 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 H3BML4 177 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 KLRC4-KLRK1H3BQV0 150 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 SULT2B1O00204 365 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC22A1O15245 554 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 DNPH1O43598 174 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 AIREO43918 545 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 EFNA2O43921 213 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ZIC3O60481 467 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 EIF1BO60739 113 aaKnown RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TRAPPC6AO75865 159 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 GABARAPO95166 117 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 VAMP5O95183 116 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 PMS2P2O95744 297 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 WDPCPO95876 746 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 BCL10O95999 233 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 IGHMP01871 453 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 AMY2AP04746 511 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OR2T7P0C7T2 308 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OCM2P0CE71 109 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OCMP0CE72 109 aaPredicted RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 SPI1P17947 270 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 NAT1P18440 290 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 AMY2BP19961 511 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 PSMA1P25786 263 aaKnown RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 GDF1P27539 372 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 CRABP1P29762 137 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ACVR1BP36896 505 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 CDKN2AP42771 156 aaKnown RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 DNASE1L1P49184 302 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 RGS6P49758 472 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 DIO1P49895 249 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ENTPD1P49961 510 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ETV1P50549 477 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 DAP3P51398 398 aaKnown RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 BCAP31P51572 246 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TUBA1BP68363 451 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms