RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PDLIM4P50479 330 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 RPS6KA3P51812 740 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 RPS23P62266 143 aaKnown RBP13.24□□□□□ -0.29
NUP50-219ENST00000497960 SLC36A3Q495N2 470 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 CLEC12AQ5QGZ9 265 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 C10orf128Q5T292 105 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 CLDN22Q8N7P3 220 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 FGFBP3Q8TAT2 258 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 FNDC8Q8TC99 324 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 HDAC2Q92769 488 aaKnown RBP13.24□□□□□ -0.29
NUP50-219ENST00000497960 SORCS2Q96PQ0 1159 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 RBP7Q96R05 134 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 CIB1Q99828 191 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 ALG12Q9BV10 488 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 IFT27Q9BW83 186 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 PLA2G12AQ9BZM1 189 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 SMURF2Q9HAU4 748 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 DYNLRB1Q9NP97 96 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 PAPOLBQ9NRJ5 636 aaKnown RBP13.24□□□□□ -0.29
NUP50-219ENST00000497960 KRT84Q9NSB2 600 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 ZNF346Q9UL40 294 aaKnown RBP13.24□□□□□ -0.29
NUP50-219ENST00000497960 RTTNQ86VV8 2226 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 TEX13CA0A0J9YWL9 993 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 A6NIZ1 184 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 XKRYO14609 159 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 LY6HO94772 140 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 SLC2A10O95528 541 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 PTHP01270 115 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 ANPEPP15144 967 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 NOS3P29474 1203 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 SDHAP31040 664 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 GLRXP35754 106 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 ZNF133P52736 654 aaPredicted RBP13.23□□□□□ -0.29
NUP50-219ENST00000497960 RAP1BP61224 184 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 RAP1AP62834 184 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 PLP2Q04941 152 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 COX10Q12887 443 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 KRR1Q13601 381 aaKnown RBP13.23□□□□□ -0.29
NUP50-219ENST00000497960 RFX4Q33E94 735 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 FAHD1Q6P587 224 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 CD300LDQ6UXZ3 194 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 DPY19L2P2Q6ZN68 376 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 SLC30A7Q8NEW0 376 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 C10orf105Q8TEF2 133 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 NSMAFQ92636 917 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 RASD2Q96D21 266 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 ERMAPQ96PL5 475 aaPredicted RBP13.23□□□□□ -0.29
NUP50-219ENST00000497960 KCNK17Q96T54 332 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 DOK1Q99704 481 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 C1orf198Q9H425 327 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 SIAEQ9HAT2 523 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 MYOZ1Q9NP98 299 aaPredicted RBP13.23□□□□□ -0.29
NUP50-219ENST00000497960 NRIP3Q9NQ35 241 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 IER3IP1Q9Y5U9 82 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 ZANQ9Y493 2812 aa13.23□□□□□ -0.29
NUP50-219ENST00000497960 IQCMA0A1B0GVH7 501 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 SLC22A23A1A5C7 686 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 INAFM1C9JVW0 142 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 SOCS2O14508 198 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 OSMP13725 252 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 IGFBP5P24593 272 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 POU1F1P28069 291 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 GUCA1AP43080 201 aaPredicted RBP13.22□□□□□ -0.29
NUP50-219ENST00000497960 DAPP51397 102 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 MRPS34P82930 218 aaKnown RBP13.22□□□□□ -0.29
NUP50-219ENST00000497960 CARTPTQ16568 116 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 MESTQ5EB52 335 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 THEM4Q5T1C6 240 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 GPR139Q6DWJ6 353 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 FAM122BQ7Z309 247 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 JAZF1Q86VZ6 243 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 LRRC18Q8N456 261 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 OR8D4Q8NGM9 314 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 OR1J2Q8NGS2 313 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 ZNF519Q8TB69 540 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 NEU4Q8WWR8 484 aaPredicted RBP13.22□□□□□ -0.29
NUP50-219ENST00000497960 MRPL24Q96A35 216 aaKnown RBP13.22□□□□□ -0.29
NUP50-219ENST00000497960 NMD3Q96D46 503 aaKnown RBP13.22□□□□□ -0.29
NUP50-219ENST00000497960 Q96M85 177 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 RBM4BQ9BQ04 359 aaKnown RBP13.22□□□□□ -0.29
NUP50-219ENST00000497960 C9orf16Q9BUW7 83 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 RBM4Q9BWF3 364 aaKnown RBP13.22□□□□□ -0.29
NUP50-219ENST00000497960 TSSK6Q9BXA6 273 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 CDH20Q9HBT6 801 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 CCNB1IP1Q9NPC3 277 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 IL20Q9NYY1 176 aa13.22□□□□□ -0.29
NUP50-219ENST00000497960 TMEM129A0AVI4 362 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 H7C1C5 153 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 NDUFS8O00217 210 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 EI24O14681 340 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 GPRIN2O60269 458 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 IGFBP1P08833 259 aaPredicted RBP13.21□□□□□ -0.29
NUP50-219ENST00000497960 CDAP32320 146 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 EVX1P49640 407 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 LCN6P62502 163 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 HSF2Q03933 536 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 FMODQ06828 376 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 KRTAP1-1Q07627 177 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 LOXL1Q08397 574 aaPredicted RBP13.21□□□□□ -0.29
NUP50-219ENST00000497960 SGCAQ16586 387 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms