RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ZNF674Q2M3X9 581 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC48A1Q6P1K1 146 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 BEND4Q6ZU67 534 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 TMPRSS11FQ6ZWK6 438 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 RNF113BQ8IZP6 322 aaKnown RBP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 AVL9Q8NBF6 648 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC25A36Q96CQ1 311 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 MRI1Q9BV20 369 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 A0A087X0M5 115 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 A0A1B0GX30 115 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 LEFTY2O00292 366 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 NRG2O14511 850 aaPredicted RBP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 HLA-DQA2P01906 255 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 CD14P08571 375 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 TACSTD2P09758 323 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 FAM157CP0CG43 387 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 BTF3P20290 206 aaKnown RBP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 ELOCQ15369 112 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 PAPD4Q6PIY7 484 aaKnown RBP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC39A5Q6ZMH5 540 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 DPPA2Q7Z7J5 298 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC30A7Q8NEW0 376 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 OR51F2Q8NH61 342 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF563Q8TA94 476 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 INTS14Q96SY0 518 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 ALX4Q9H161 411 aaPredicted RBP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 GAR1Q9NY12 217 aaKnown RBP11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 OR5AC2Q9NZP5 309 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 CACFD1Q9UGQ2 172 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 LAMP5Q9UJQ1 280 aa11.84□□□□□ -0.51
GAPVD1-220ENST00000497580 STK17BO94768 372 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 IGHV2-5P01817 119 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 NR2C1P13056 603 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 SELPP16109 830 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 MAP3K8P41279 467 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 TCTN1Q2MV58 587 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 GPX8Q8TED1 209 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 C1orf198Q9H425 327 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 METTL8Q9H825 291 aaKnown RBP11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 PPP4R1LQ9P1A2 415 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 A0A1B0GTQ1 180 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 ARGFXA6NJG6 315 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 SLC31A2O15432 143 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 TSPAN15O95858 294 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 SFTPBP07988 381 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 MOGAT2Q3SYC2 334 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 GLYATL3Q5SZD4 288 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 DPY19L4Q7Z388 723 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 AMZ2Q86W34 360 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 TMEFF1Q8IYR6 380 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 OR13C9Q8NGT0 318 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 ZNF417Q8TAU3 575 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 GPR148Q8TDV2 347 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 ASB13Q8WXK3 278 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 OVCA2Q8WZ82 227 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 MFRPQ9BY79 579 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 PELI2Q9HAT8 420 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 TAF9BQ9HBM6 251 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 MRM2Q9UI43 246 aaKnown RBP11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 TRBV23OR9-2A0A075B6M9 112 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 A0A1W2PPC1 479 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 ADRB3P13945 408 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 RBP2P50120 134 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 DCST2Q5T1A1 773 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 TMEM244Q5VVB8 128 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 PRAMEF8Q5VWM4 474 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 PRAMEF7Q5VXH5 474 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 C2orf15Q8WU43 125 aaKnown RBP11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 SMOC1Q9H4F8 434 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 FAM86C1Q9NVL1 165 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 KCNE5Q9UJ90 142 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 FBXO7Q9Y3I1 522 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 INSL5Q9Y5Q6 135 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 KPTNQ9Y664 436 aa11.83□□□□□ -0.52
GAPVD1-220ENST00000497580 TEX13DA0A0J9YY54 714 aaPredicted RBP11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 LOC100289279A0A1B0GTE1 492 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 H0YIZ8 118 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 STMND1H3BQB6 276 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 OR10H2O60403 315 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 SULT1A1P50225 295 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 EXOSC7Q15024 291 aaKnown RBP11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 C14orf28Q4W4Y0 310 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 LY6G5CQ5SRR4 150 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 Q6ZNB5 142 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 HIST2H3AQ71DI3 136 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 SLC35D2Q76EJ3 337 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 TGIF2LXQ8IUE1 241 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 TMEM104Q8NE00 496 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 DTD2Q96FN9 168 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 OPA3Q9H6K4 179 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 CYTL1Q9NRR1 136 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 SLC22A13Q9Y226 551 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 WIF1Q9Y5W5 379 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 MDC1Q14676 2089 aaKnown RBP11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 URB1O60287 2271 aaKnown RBP11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 MANSC4A6NHS7 340 aaPredicted RBP11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 NPIPB9F8W1W9 429 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 GMFGO60234 142 aa11.82□□□□□ -0.52
GAPVD1-220ENST00000497580 ZBTB25P24278 435 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms