RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 TTC29Q8NA56 475 aaPredicted RBP2.6□□□□□ -1.99
SMC4-225ENST00000497203 CT45A3Q8NHU0 189 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 LYPD6BQ8NI32 183 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 MARCH1Q8TCQ1 289 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 CAPSLQ8WWF8 208 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 STARD8Q92502 1023 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 NRGNQ92686 78 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 DUS3LQ96G46 650 aaKnown RBP2.6□□□□□ -1.99
SMC4-225ENST00000497203 WFIKKN1Q96NZ8 548 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 BPIFA3Q9BQP9 254 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 SLC17A9Q9BYT1 436 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 IQCGQ9H095 443 aaKnown RBP2.6□□□□□ -1.99
SMC4-225ENST00000497203 RBAKQ9NYW8 714 aaPredicted RBP2.6□□□□□ -1.99
SMC4-225ENST00000497203 RABL2AQ9UBK7 228 aaPredicted RBP2.6□□□□□ -1.99
SMC4-225ENST00000497203 RAB26Q9ULW5 256 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 SLC17A4Q9Y2C5 497 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 MRPS18BQ9Y676 258 aaKnown RBP2.6□□□□□ -1.99
SMC4-225ENST00000497203 NACAE9PAV3 2078 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 IGLV4-69A0A075B6H9 119 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 IGHV3-74A0A0B4J1X5 117 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 KBTBD11-OT1A0A1B0GTJ5 212 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 SPECC1L-ADORA2AF8WAN1 911 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 INS-IGF2F8WCM5 200 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 H0YHG0 523 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 H0YIV9 168 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 NUPL2O15504 423 aaKnown RBP2.59□□□□□ -1.99
SMC4-225ENST00000497203 DNAJB6O75190 326 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 SPAG7O75391 227 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 CLDN11O75508 207 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 CTAG2O75638 210 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 GNAO1P09471 354 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 LONP1P36776 959 aaKnown RBP2.59□□□□□ -1.99
SMC4-225ENST00000497203 CEACAM6P40199 344 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 CDKN2BP42772 138 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 CSNK1EP49674 416 aaKnown RBP2.59□□□□□ -1.99
SMC4-225ENST00000497203 VSX2P58304 361 aaPredicted RBP2.59□□□□□ -1.99
SMC4-225ENST00000497203 SP4Q02446 784 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 TRAM2Q15035 370 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 PSMD5Q16401 504 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 POU2AF1Q16633 256 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 UBE2SQ16763 222 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 RSPO1Q2MKA7 263 aaPredicted RBP2.59□□□□□ -1.99
SMC4-225ENST00000497203 UBE2UQ5VVX9 321 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 SPECC1LQ69YQ0 1117 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 MICU2Q8IYU8 434 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 JAGN1Q8N5M9 183 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 OR10J6PQ8NGY7 276 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 ZFP90Q8TF47 636 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 ECHDC3Q96DC8 303 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 CEP170P1Q96L14 293 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 BMFQ96LC9 184 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 NAP1L5Q96NT1 182 aaPredicted RBP2.59□□□□□ -1.99
SMC4-225ENST00000497203 SLC25A2Q9BXI2 301 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 TPK1Q9H3S4 243 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 NTN4Q9HB63 628 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 MRPS30Q9NP92 439 aaKnown RBP2.59□□□□□ -1.99
SMC4-225ENST00000497203 CCNB1IP1Q9NPC3 277 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 LHX9Q9NQ69 397 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 MRPL22Q9NWU5 206 aaKnown RBP2.59□□□□□ -1.99
SMC4-225ENST00000497203 UVRAGQ9P2Y5 699 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 CLN8Q9UBY8 286 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 SAR1BQ9Y6B6 198 aa2.59□□□□□ -1.99
SMC4-225ENST00000497203 IGLV3-16A0A075B6K0 115 aa2.58□□□□□ -2
SMC4-225ENST00000497203 A0A096LNJ9 63 aa2.58□□□□□ -2
SMC4-225ENST00000497203 SCAMP2O15127 329 aaKnown RBP2.58□□□□□ -2
SMC4-225ENST00000497203 CASC3O15234 703 aaKnown RBP2.58□□□□□ -2
SMC4-225ENST00000497203 ANGPTL7O43827 346 aa2.58□□□□□ -2
SMC4-225ENST00000497203 CCNB2O95067 398 aa2.58□□□□□ -2
SMC4-225ENST00000497203 SLC25A14O95258 325 aaPredicted RBP2.58□□□□□ -2
SMC4-225ENST00000497203 SERPINE2P07093 398 aa2.58□□□□□ -2
SMC4-225ENST00000497203 ASGR1P07306 291 aa2.58□□□□□ -2
SMC4-225ENST00000497203 OR8G3PP0DMU2 310 aa2.58□□□□□ -2
SMC4-225ENST00000497203 OR5H8P0DN80 308 aa2.58□□□□□ -2
SMC4-225ENST00000497203 MAS1LP35410 378 aa2.58□□□□□ -2
SMC4-225ENST00000497203 MAGEA1P43355 309 aa2.58□□□□□ -2
SMC4-225ENST00000497203 NAMPTP43490 491 aa2.58□□□□□ -2
SMC4-225ENST00000497203 UCNP55089 124 aa2.58□□□□□ -2
SMC4-225ENST00000497203 IFT88Q13099 833 aa2.58□□□□□ -2
SMC4-225ENST00000497203 ERCC8Q13216 396 aa2.58□□□□□ -2
SMC4-225ENST00000497203 MAB21L1Q13394 359 aa2.58□□□□□ -2
SMC4-225ENST00000497203 PTPN20Q4JDL3 420 aa2.58□□□□□ -2
SMC4-225ENST00000497203 BEX5Q5H9J7 111 aa2.58□□□□□ -2
SMC4-225ENST00000497203 C1orf185Q5T7R7 199 aa2.58□□□□□ -2
SMC4-225ENST00000497203 ANGPTL8Q6UXH0 198 aa2.58□□□□□ -2
SMC4-225ENST00000497203 MBOAT1Q6ZNC8 495 aa2.58□□□□□ -2
SMC4-225ENST00000497203 TIFABQ6ZNK6 161 aa2.58□□□□□ -2
SMC4-225ENST00000497203 Q6ZVH6 145 aa2.58□□□□□ -2
SMC4-225ENST00000497203 C12orf56Q8IXR9 622 aa2.58□□□□□ -2
SMC4-225ENST00000497203 PRSS58Q8IYP2 241 aa2.58□□□□□ -2
SMC4-225ENST00000497203 OFCC1Q8IZS5 231 aa2.58□□□□□ -2
SMC4-225ENST00000497203 PQLC3Q8N755 202 aa2.58□□□□□ -2
SMC4-225ENST00000497203 Q8N976 141 aa2.58□□□□□ -2
SMC4-225ENST00000497203 NOXO1Q8NFA2 376 aa2.58□□□□□ -2
SMC4-225ENST00000497203 BPIFCQ8NFQ6 507 aa2.58□□□□□ -2
SMC4-225ENST00000497203 OR9G4Q8NGQ1 327 aa2.58□□□□□ -2
SMC4-225ENST00000497203 OR5K2Q8NHB8 316 aa2.58□□□□□ -2
SMC4-225ENST00000497203 ZNF596Q8TC21 504 aa2.58□□□□□ -2
SMC4-225ENST00000497203 EEF1AKMT3Q96AZ1 226 aa2.58□□□□□ -2
SMC4-225ENST00000497203 GALNT14Q96FL9 552 aa2.58□□□□□ -2
SMC4-225ENST00000497203 PRRC1Q96M27 445 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms