RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 GATSQ8NAP1 163 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 NECAP1Q8NC96 275 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 BBOF1Q8ND07 529 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 CCDC148Q8NFR7 591 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 OR4C5Q8NGB2 326 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 OR4F6Q8NGB9 312 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 AGR3Q8TD06 166 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 GEMIN6Q8WXD5 167 aaKnown RBP1.39□□□□□ -2.19
VPS26A-208ENST00000497022 ELMO1Q92556 727 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 SLC38A4Q969I6 547 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 PANX1Q96RD7 426 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 CENPKQ9BS16 269 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 MTG1Q9BT17 334 aaPredicted RBP1.39□□□□□ -2.19
VPS26A-208ENST00000497022 GABARAPL3Q9BY60 117 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 TMEM185BQ9H7F4 350 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 UGT1A7Q9HAW7 530 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 UGT1A10Q9HAW8 530 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 UGT1A8Q9HAW9 530 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 CRLF2Q9HC73 371 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 ZNF160Q9HCG1 818 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 HMG20AQ9NP66 347 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 DDX18Q9NVP1 670 aaKnown RBP1.39□□□□□ -2.19
VPS26A-208ENST00000497022 KIAA1257Q9ULG3 409 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 PACSIN2Q9UNF0 486 aaPredicted RBP1.39□□□□□ -2.19
VPS26A-208ENST00000497022 CARHSP1Q9Y2V2 147 aaKnown RBP1.39□□□□□ -2.19
VPS26A-208ENST00000497022 S4R3C0 116 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 LTBP4Q8N2S1 1624 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 WDR19Q8NEZ3 1342 aa1.39□□□□□ -2.19
VPS26A-208ENST00000497022 NINLQ9Y2I6 1382 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 GOLGA6L7A0A1B0GV03 622 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 SERTM2A0A1B0GWG4 89 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 TMEM223A0PJW6 202 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 SMCO3A2RU48 225 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 NCF1BA6NI72 391 aaPredicted RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 OR5B21A6NL26 309 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 NCF1CA8MVU1 366 aaPredicted RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 CASQ2O14958 399 aaPredicted RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 CASC3O15234 703 aaKnown RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 TOM1O60784 492 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 DNAJB6O75190 326 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 CTAG2O75638 210 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 CCNKO75909 580 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 OR7A10O76100 309 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 H6PDO95479 791 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 C1orf105O95561 183 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 FTH1P02794 183 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 CT62P0C5K7 136 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 OR8G3PP0DMU2 310 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 ZNF43P17038 809 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 IFNA8P32881 189 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 VHLP40337 213 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 NAMPTP43490 491 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 KIR3DL2P43630 455 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 TNNT2P45379 298 aaPredicted RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 RGS8P57771 180 aaPredicted RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 RPS21P63220 83 aaKnown RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 LOXL1Q08397 574 aaPredicted RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 TGFBIQ15582 683 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 ALKBH6Q3KRA9 238 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 VPS26BQ4G0F5 336 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 SLC8B1Q6J4K2 584 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 CNIH2Q6PI25 160 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 NCCRP1Q6ZVX7 275 aaPredicted RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 BZW1Q7L1Q6 419 aaKnown RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 CENPQQ7L2Z9 268 aaPredicted RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 PLA2G4DQ86XP0 818 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 OFCC1Q8IZS5 231 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 LGI3Q8N145 548 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 GTPBP8Q8N3Z3 284 aaPredicted RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 MREGQ8N565 214 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 B3GNT7Q8NFL0 401 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 OR7G2Q8NG99 324 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 FAM81AQ8TBF8 368 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 TSEN15Q8WW01 171 aaKnown RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 TGS1Q96RS0 853 aaKnown RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 C11orf70Q9BRQ4 267 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 GEMIN7Q9H840 131 aaKnown RBP1.38□□□□□ -2.19
VPS26A-208ENST00000497022 ANKRA2Q9H9E1 313 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 EXD2Q9NVH0 621 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 ZNF586Q9NXT0 402 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 GCNT4Q9P109 453 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 N6AMT1Q9Y5N5 214 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 TNS2Q63HR2 1409 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 TICRRQ7Z2Z1 1910 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 TTC41PQ6P2S7 1318 aa1.38□□□□□ -2.19
VPS26A-208ENST00000497022 NID2Q14112 1375 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 IGLV3-22A0A075B6J6 115 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 IGKV1D-13A0A0B4J2D9 117 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 TRBV11-1A0A0K0K1C0 115 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 A0A1B0GVI7 797 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 CIB4A0PJX0 185 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 ZNF850A8MQ14 1090 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 H0YC42 278 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 L7N2F9 121 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 GOSR2O14653 212 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 LSM1O15116 133 aaKnown RBP1.37□□□□□ -2.19
VPS26A-208ENST00000497022 RAD51BO15315 384 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 OR2J3O76001 311 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 CDRT1O95170 752 aa1.37□□□□□ -2.19
VPS26A-208ENST00000497022 FGF1P05230 155 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms