RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TM6SF2Q9BZW4 377 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 MFFQ9GZY8 342 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 RAB1BQ9H0U4 201 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 SLC25A51Q9H1U9 297 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 OR2AG1Q9H205 316 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 GBA3Q9H227 469 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 MRPL47Q9HD33 250 aaKnown RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 INIPQ9NRY2 104 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 PHF11Q9UIL8 331 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 ANAPC7Q9UJX3 599 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 PRPF19Q9UMS4 504 aaKnown RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 EIF3LQ9Y262 564 aaKnown RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 SLC22A14Q9Y267 594 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 USP16Q9Y5T5 823 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 ADAMTS7Q9UKP4 1686 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 GRIN2DO15399 1336 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 C4BP0C0L5 1744 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 KCNE1BA0A087WTH5 132 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 GOLGA8QA0A0J9YX86 632 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 LOC105371267A0A1B0GV96 52 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 USP27XA6NNY8 438 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 CLOCKO15516 846 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 TAPBPO15533 448 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 APOEP02649 317 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 SERPIND1P05546 499 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 GOLGA8HP0CJ92 632 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 EIF2S2P20042 333 aaKnown RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 M6PRP20645 277 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 KITLGP21583 273 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 IL32P24001 234 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 CD1CP29017 333 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 HMOX2P30519 316 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 RPL13AP40429 203 aaKnown RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 ARRB1P49407 418 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 NOVA1P51513 510 aaKnown RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 DSTNP60981 165 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 RPS6P62753 249 aaKnown RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 RPL32P62910 135 aaKnown RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 ELF3P78545 371 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 IL9RQ01113 521 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 LRRC63Q05C16 580 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 C18orf21Q32NC0 220 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 BEND3Q5T5X7 828 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 IGFL3Q6UXB1 125 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 LANCL3Q6ZV70 420 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 SNX20Q7Z614 316 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 MMAAQ8IVH4 418 aaKnown RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 CSNK1A1LQ8N752 337 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 OR10A7Q8NGE5 316 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 OR51L1Q8NGJ5 315 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 OR4A15Q8NGL6 344 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 CACNG8Q8WXS5 425 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 TNFRSF14Q92956 283 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 MRGPRFQ96AM1 343 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 C18orf25Q96B23 403 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 C8orf44Q96CB5 159 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 HAUS1Q96CS2 278 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 ANKRD36BP1Q96IX9 119 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 MBOAT4Q96T53 435 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 SLC6A7Q99884 636 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 TIPINQ9BVW5 301 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 PRRG3Q9BZD7 231 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 COMMD4Q9H0A8 199 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 TPK1Q9H3S4 243 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 UCK1Q9HA47 277 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 DYRK4Q9NR20 520 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 FAIMQ9NVQ4 179 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 MRPL39Q9NYK5 338 aaKnown RBP3.66□□□□□ -1.82
SF3B1-212ENST00000496458 EURLQ9NYK6 297 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 ZNF221Q9UK13 617 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 PPIL1Q9Y3C6 166 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 CBY1Q9Y3M2 126 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 L3MBTL1Q9Y468 752 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 PEX16Q9Y5Y5 336 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 MRC1P22897 1456 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 PAPPAQ13219 1627 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 UBR2Q8IWV8 1755 aa3.66□□□□□ -1.82
SF3B1-212ENST00000496458 KCPQ6ZWJ8 1503 aa3.65□□□□□ -1.82
SF3B1-212ENST00000496458 COL5A3P25940 1745 aaPredicted RBP3.65□□□□□ -1.82
SF3B1-212ENST00000496458 TJP1Q07157 1748 aa3.65□□□□□ -1.82
SF3B1-212ENST00000496458 A0A1W2PPV9 198 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 FAM74A7A6NL05 159 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 ZNF99A8MXY4 864 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-212ENST00000496458 TRIM49D1C9J1S8 452 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 SULT1B1O43704 296 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 CALUO43852 315 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-212ENST00000496458 OR2J3O76001 311 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 FAM107AO95990 144 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 GAPDHP04406 335 aaKnown RBP3.65□□□□□ -1.83
SF3B1-212ENST00000496458 GTF2E2P29084 291 aaKnown RBP3.65□□□□□ -1.83
SF3B1-212ENST00000496458 PSMC5P62195 406 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 GNGT1P63211 74 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 CSNK1G2P78368 415 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 RAD51Q06609 339 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 CHI3L2Q15782 390 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 VPS26BQ4G0F5 336 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 FAM74A3Q4VXF1 159 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 ZCWPW2Q504Y3 356 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 OR52E8Q6IFG1 317 aa3.65□□□□□ -1.83
SF3B1-212ENST00000496458 HACD2Q6Y1H2 254 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms