RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 AKR7LQ8NHP1 331 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 FANK1Q8TC84 345 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 RDH5Q92781 318 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 MCUR1Q96AQ8 359 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 PYURFQ96I23 114 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 Q96M85 177 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 NSMCE2Q96MF7 247 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 FUZQ9BT04 418 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 ZNF416Q9BWM5 594 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 WNT5BQ9H1J7 359 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 NRIP3Q9NQ35 241 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 HINT3Q9NQE9 182 aaKnown RBP13.46□□□□□ -0.25
HDAC4-213ENST00000496347 TAAR3PQ9P1P4 343 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 EIF3KQ9UBQ5 218 aaKnown RBP13.46□□□□□ -0.25
HDAC4-213ENST00000496347 CD300AQ9UGN4 299 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 AURKCQ9UQB9 309 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 V9GYQ6 96 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 C17orf100A8MU93 164 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 LILRA1O75019 489 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 NCR1O76036 304 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 IGHV3-13P01766 116 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 CTLA4P16410 223 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 HNF1AP20823 631 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 CCNOP22674 350 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 IGFBP5P24593 272 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 WNT5AP41221 380 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 GYS2P54840 703 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 SPIBQ01892 262 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 SEC23BQ15437 767 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 TMEM154Q6P9G4 183 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 DPY19L2P2Q6ZN68 376 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 RFPL4BQ6ZWI9 263 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 ICA1LQ8NDH6 482 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 OR1J1Q8NGS3 322 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 RASD2Q96D21 266 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 SNX18Q96RF0 628 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 SHARPINQ9H0F6 387 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 ARL8BQ9NVJ2 186 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 NKIRAS2Q9NYR9 191 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 VSX1Q9NZR4 365 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-213ENST00000496347 CGGBP1Q9UFW8 167 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-213ENST00000496347 TANC2Q9HCD6 1990 aa13.45□□□□□ -0.26
HDAC4-213ENST00000496347 LOC100509620A0A075B734 347 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 LRP5LA4QPB2 252 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 UNC119BA6NIH7 251 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 PTP4A3O75365 173 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 DIRAS1O95057 198 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 TXNDC12O95881 172 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 CLPTM1O96005 669 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 HPXP02790 462 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 FABP3P05413 133 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 COX5BP10606 129 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 FPR3P25089 353 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 RPS6KA3P51812 740 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 AQP6Q13520 282 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 MBNL2Q5VZF2 373 aaKnown RBP13.44□□□□□ -0.26
HDAC4-213ENST00000496347 SMARCD3Q6STE5 483 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 ARL9Q6T311 187 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 THSD4Q6ZMP0 1018 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 OR52J3Q8NH60 311 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 CDRT15Q96T59 188 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 BEX2Q9BXY8 128 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 SYT4Q9H2B2 425 aa13.44□□□□□ -0.26
HDAC4-213ENST00000496347 DOK2O60496 412 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 RP2O75695 350 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 GADD45GO95257 159 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 GCH1P30793 250 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 IFNGR2P38484 337 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 GPR6P46095 362 aaPredicted RBP13.43□□□□□ -0.26
HDAC4-213ENST00000496347 ARHGDIAP52565 204 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 TMEM33P57088 247 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 FXYD6P3P58550 94 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 MXRA7P84157 204 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 TRIP10Q15642 601 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 ZNF718Q3SXZ3 478 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 ZMAT1Q5H9K5 638 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 MTX3Q5HYI7 312 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 FAM209AQ5JX71 171 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 ZNF774Q6NX45 483 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 PGM2L1Q6PCE3 622 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 DNM1P34Q6PK57 102 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 GLB1L2Q8IW92 636 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 DEFB107AQ8IZN7 70 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 LINC01356Q8N9X3 169 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 NPEPL1Q8NDH3 523 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 ABHD4Q8TB40 342 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 IPCEF1Q8WWN9 437 aaPredicted RBP13.43□□□□□ -0.26
HDAC4-213ENST00000496347 MARS2Q96GW9 593 aaKnown RBP13.43□□□□□ -0.26
HDAC4-213ENST00000496347 C1orf159Q96HA4 380 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 ELOVL3Q9HB03 270 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 EMC7Q9NPA0 242 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 IL1RAPQ9NPH3 570 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 CYSLTR2Q9NS75 346 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 ATPIF1Q9UII2 106 aa13.43□□□□□ -0.26
HDAC4-213ENST00000496347 PLSCR5A0PG75 271 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 LYNX1G3V0Z9 82 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 SOCS2O14508 198 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 SGCEO43556 437 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 KHDRBS3O75525 346 aaKnown RBP13.42□□□□□ -0.26
HDAC4-213ENST00000496347 ABHD16AO95870 558 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms