RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 TPK1Q9H3S4 243 aa17.74■□□□□ 0.43
COL9A2-211ENST00000496215 EMC7Q9NPA0 242 aa17.74■□□□□ 0.43
COL9A2-211ENST00000496215 TIMM10BQ9Y5J6 103 aa17.74■□□□□ 0.43
COL9A2-211ENST00000496215 HIVEP2P31629 2446 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 C5orf49A4QMS7 147 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 KHDRBS3O75525 346 aaKnown RBP17.73■□□□□ 0.43
COL9A2-211ENST00000496215 RAD52P43351 418 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 UCP2P55851 309 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 DNM1P34Q6PK57 102 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 PTCHD4Q6ZW05 846 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 SYT9Q86SS6 491 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 LRP11Q86VZ4 500 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 GLB1L2Q8IW92 636 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 ZCCHC24Q8N2G6 241 aaKnown RBP17.73■□□□□ 0.43
COL9A2-211ENST00000496215 OR9Q2Q8NGE9 314 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 POM121L2Q96KW2 1035 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 FOXN4Q96NZ1 517 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 WACQ9BTA9 647 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 MYEF2Q9P2K5 600 aaKnown RBP17.73■□□□□ 0.43
COL9A2-211ENST00000496215 DUSP13Q9UII6 198 aa17.73■□□□□ 0.43
COL9A2-211ENST00000496215 SONP18583 2426 aaKnown RBP17.73■□□□□ 0.43
COL9A2-211ENST00000496215 LOC390937A0A1W2PQ73 354 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 IMPA2O14732 288 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 GYG2O15488 501 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 CCNB2O95067 398 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 SCG5P05408 212 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 IGFBP1P08833 259 aaPredicted RBP17.72■□□□□ 0.43
COL9A2-211ENST00000496215 NOS3P29474 1203 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 ALDH3B1P43353 468 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 HMGA2P52926 109 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 KLF3P57682 345 aaPredicted RBP17.72■□□□□ 0.43
COL9A2-211ENST00000496215 SELENOVP59797 346 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 ERVS71-1P61550 626 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 SCRN3Q0VDG4 424 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 MAD2L1BPQ15013 274 aaPredicted RBP17.72■□□□□ 0.43
COL9A2-211ENST00000496215 RPL13AP3Q6NVV1 102 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 ZNF774Q6NX45 483 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 UGT2A3Q6UWM9 527 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 UNQ6126/PRO20091Q6UXV3 157 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 OR52L1Q8NGH7 329 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 OR4C15Q8NGM1 316 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 SAMD8Q96LT4 415 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 BTBD10Q9BSF8 475 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 NUAK2Q9H093 628 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 MS4A5Q9H3V2 200 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 REEP1Q9H902 201 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 EIF3KQ9UBQ5 218 aaKnown RBP17.72■□□□□ 0.43
COL9A2-211ENST00000496215 REV1Q9UBZ9 1251 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 CDH10Q9Y6N8 788 aa17.72■□□□□ 0.43
COL9A2-211ENST00000496215 LOC100509620A0A075B734 347 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 ARPC3O15145 178 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 DOK2O60496 412 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 RENP00797 406 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 RAP2AP10114 183 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 DAOP14920 347 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 CRABP1P29762 137 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 CDKN2AP42771 156 aaKnown RBP17.71■□□□□ 0.43
COL9A2-211ENST00000496215 PPP2R2BQ00005 443 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 LOXL1Q08397 574 aaPredicted RBP17.71■□□□□ 0.43
COL9A2-211ENST00000496215 TRAP1Q12931 704 aaKnown RBP17.71■□□□□ 0.43
COL9A2-211ENST00000496215 AQP6Q13520 282 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 NKPD1Q17RQ9 610 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 OR2T5Q6IEZ7 315 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 LEG1Q6P5S2 330 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 OR1J1Q8NGS3 322 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 OR2T29Q8NH02 315 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 SYNPRQ8TBG9 265 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 C11orf40Q8WZ69 217 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 GPR160Q9UJ42 338 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 NDRG4Q9ULP0 352 aaKnown RBP17.71■□□□□ 0.43
COL9A2-211ENST00000496215 COA3Q9Y2R0 106 aaPredicted RBP17.71■□□□□ 0.43
COL9A2-211ENST00000496215 SAMHD1Q9Y3Z3 626 aaKnown RBP17.71■□□□□ 0.43
COL9A2-211ENST00000496215 ABCA1O95477 2261 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 ABCA2Q9BZC7 2435 aa17.71■□□□□ 0.43
COL9A2-211ENST00000496215 YLPM1P49750 1951 aaKnown RBP17.71■□□□□ 0.43
COL9A2-211ENST00000496215 CHD3Q12873 2000 aaKnown RBP17.71■□□□□ 0.42
COL9A2-211ENST00000496215 INAFM1C9JVW0 142 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 ACOT8O14734 319 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 ZNF250P15622 560 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 WNT5AP41221 380 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 KRTAP21-3Q3LHN1 58 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 ZNF101Q8IZC7 436 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 AQP11Q8NBQ7 271 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 SNX33Q8WV41 574 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 SNX18Q96RF0 628 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 EGLN3Q9H6Z9 239 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 VNN3Q9NY84 501 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 POLR1DQ9Y2S0 133 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 U3KQV3 271 aa17.7■□□□□ 0.42
COL9A2-211ENST00000496215 IGLV3-9A0A075B6K5 115 aa17.69■□□□□ 0.42
COL9A2-211ENST00000496215 VWC2LB2RUY7 222 aa17.69■□□□□ 0.42
COL9A2-211ENST00000496215 SGCEO43556 437 aa17.69■□□□□ 0.42
COL9A2-211ENST00000496215 HIST1H1CP16403 213 aaKnown RBP17.69■□□□□ 0.42
COL9A2-211ENST00000496215 USF1P22415 310 aaPredicted RBP17.69■□□□□ 0.42
COL9A2-211ENST00000496215 NR4A2P43354 598 aa17.69■□□□□ 0.42
COL9A2-211ENST00000496215 HTR5AP47898 357 aa17.69■□□□□ 0.42
COL9A2-211ENST00000496215 LSM6P62312 80 aaKnown RBP17.69■□□□□ 0.42
COL9A2-211ENST00000496215 PPP1R8Q12972 351 aaKnown RBP17.69■□□□□ 0.42
COL9A2-211ENST00000496215 GGTLC2Q14390 218 aa17.69■□□□□ 0.42
COL9A2-211ENST00000496215 TMEM249Q2WGJ8 235 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms