RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 RNF128Q8TEB7 428 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 TCEAL3Q969E4 200 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 ARL5BQ96KC2 179 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 JSRP1Q96MG2 331 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 DERL3Q96Q80 235 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 SMAD5Q99717 465 aaKnown RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 TIMP4Q99727 224 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 B3GNT4Q9C0J1 378 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 C1orf198Q9H425 327 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 SMOC1Q9H4F8 434 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 LIN7BQ9HAP6 207 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 ELOVL3Q9HB03 270 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 B3GAT2Q9NPZ5 323 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 CYSLTR2Q9NS75 346 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 COPZ2Q9P299 210 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 MRM2Q9UI43 246 aaKnown RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 COA3Q9Y2R0 106 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 SIRT4Q9Y6E7 314 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 NCOA6Q14686 2063 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 DNAH14Q0VDD8 3507 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 GCN1Q92616 2671 aaKnown RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 ZFYVE26Q68DK2 2539 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ELOA3CA0A087WX78 387 aaPredicted RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 TRBV5-5A0A0J9YX44 114 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 MEGF11A6BM72 1044 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ACOD1A6NK06 481 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 AQP7P3A6NL99 342 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ZNF878C9JN71 531 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 MS4A18H0YCH9 400 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 STMND1H3BQB6 276 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 LINC01387J3KSC0 135 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 PSMD9O00233 223 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 LYRM1O43325 122 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 SULT1B1O43704 296 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ORC5O43913 435 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 UPK3AO75631 287 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 TPPPO94811 219 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ZFPL1O95159 310 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ABHD16AO95870 558 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 APOC1P02654 83 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 CSF3P09919 207 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 GSTT2BP0CG30 244 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 TRAPPC2P0DI81 140 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 TRAPPC2BP0DI82 140 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 EPXP11678 715 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 CTLA4P16410 223 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ELK1P19419 428 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ACHEP22303 614 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 TCEA1P23193 301 aaKnown RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 CD82P27701 267 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 LAP3P28838 519 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 DCTDP32321 178 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 FAUP35544 74 aaKnown RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 DLSTP36957 453 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 CSNK1A1P48729 337 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 CYB561P49447 251 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 RAB25P57735 213 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 FOXL2P58012 376 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 OC90Q02509 493 aaPredicted RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 ROM1Q03395 351 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 INSL4Q14641 139 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ZNF239Q16600 458 aaKnown RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 MS4A18Q3C1V0 323 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 TMEM176BQ3YBM2 270 aaPredicted RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 ZNF684Q5T5D7 378 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 BCL2L15Q5TBC7 163 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ABHD17BQ5VST6 288 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 RSBN1Q5VWQ0 802 aaPredicted RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 OR7E24Q6IFN5 339 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 TMPPEQ6ZT21 453 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 LUZP2Q86TE4 346 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 CDH24Q86UP0 819 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 TMPRSS12Q86WS5 348 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ARMC10Q8N2F6 343 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 TOMM5Q8N4H5 51 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 NKAIN3Q8N8D7 197 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 OR13C5Q8NGS8 318 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 OR6N1Q8NGY5 312 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 OR6X1Q8NH79 312 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 OR14L1PQ8NHC6 308 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 SMAP2Q8WU79 429 aaPredicted RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 MIB2Q96AX9 1013 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 INTS12Q96CB8 462 aaKnown RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 S100A16Q96FQ6 103 aaKnown RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 SLC25A44Q96H78 314 aaPredicted RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 ZC3HAV1LQ96H79 300 aaKnown RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 TXNDC15Q96J42 360 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 C4orf45Q96LM5 186 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 FER1L6-AS2Q96M78 137 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 DCLRE1CQ96SD1 692 aaKnown RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 WACQ9BTA9 647 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 ABHD6Q9BV23 337 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 RBFOX1Q9NWB1 397 aaKnown RBP6.19□□□□□ -1.42
USP39-219ENST00000496047 MALT1Q9UDY8 824 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 FBXL2Q9UKC9 423 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 HHLA2Q9UM44 414 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 FOXJ3Q9UPW0 622 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 CAMK2AQ9UQM7 478 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 LRP12Q9Y561 859 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 R4GMQ9 66 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms